Extending Cohort generation results with simple demographics available in Cohort Characterization

js/pages/cohort-definitions/cohort-definition-manager.html

@@ -330,7 +330,7 @@ <h3 data-bind="text: ko.i18n('cohortDefinitions.cohortDefinitionManager.panels.a
 					</tbody>
 				</table>
 				<!-- ko if: selectedReportSource() -->
-				<cohort-reports params="cohort: currentCohortDefinition, source: selectedReportSource"></cohort-reports>
+				<cohort-reports params="cohort: currentCohortDefinition, source: selectedReportSource, infoSelected: selectedReportSource"></cohort-reports>
 				<!-- /ko -->
 			</div>
 			<div role="tabpanel" data-bind="css: { active: $component.tabMode() == 'reporting' }" class="tab-pane">
@@ -793,4 +793,13 @@ <h3 data-bind="text: ko.i18n('cohortDefinitions.cohortDefinitionManager.panels.a
 	</div>
 </script>
 
+<script type="text/html" id="generation-checkbox-demographic">
+	<span>
+		<input class="hover-toolbox" type="checkbox" data-bind="attr:{ id: $data.sourceKey } , checked: viewDemographic, tooltip: 'Results with Demographics', eventListener: [ 
+			{event: 'mouseover', selector: 'input', callback: $component.addToolTipDemographic },
+			{event: 'mouseout', selector: 'input', callback: $component.removeToolTipDemographic }, 
+			{event: 'mouseup', selector: 'input', callback: $component.handleViewDemographic }]" data-placement="right"/>
+	</span>
+</script>
+
 <!-- /ko -->

js/pages/cohort-definitions/cohort-definition-manager.js

@@ -58,7 +58,8 @@ define(['jquery', 'knockout', 'text!./cohort-definition-manager.html',
 	'utilities/sql',
 	'components/conceptset/conceptset-list',
 	'components/name-validation',
-	'components/versions/versions'
+	'components/versions/versions',
+	'databindings/tooltipBinding'
 ], function (
 	$,
 	ko,
@@ -601,6 +602,16 @@ define(['jquery', 'knockout', 'text!./cohort-definition-manager.html',
 				title: ko.i18n('cohortDefinitions.cohortDefinitionManager.panels.generationDuration', 'Generation Duration'),
 				data: 'executionDuration'
 			}, {
+				title: ko.i18n(
+				  'cohortDefinitions.cohortDefinitionManager.panels.generationDuration3',
+				  'Demographics'
+				),
+				data: 'viewDemographic',
+				sortable: false,
+				tooltip: 'Results with Demographics',
+				render: () =>
+				  `<span data-bind="template: {name: 'generation-checkbox-demographic', data: $data }"></span>`,
+			},{
 				sortable: false,
 				className: 'generation-buttons-column',
 				render: () => `<span data-bind="template: { name: 'generation-buttons', data: $data }"></span>`
@@ -653,6 +664,8 @@ define(['jquery', 'knockout', 'text!./cohort-definition-manager.html',
 									source.personCount(commaFormatted(info.personCount));
 									source.recordCount(commaFormatted(info.recordCount));
 									source.failMessage(info.failMessage);
+									source.ccGenerateId(info.ccGenerateId);
+									source.viewDemographic(info.isChooseDemographic);
 								}
 							}
 						});
@@ -1094,13 +1107,25 @@ define(['jquery', 'knockout', 'text!./cohort-definition-manager.html',
 			if (this.selectedSource() && this.selectedSource().sourceId === source.sourceId) {
 				this.toggleCohortReport(null);
 			}
-			cohortDefinitionService.generate(this.currentCohortDefinition().id(), source.sourceKey)
+			cohortDefinitionService.generate(this.currentCohortDefinition().id(), source.sourceKey, source.viewDemographic())
 				.catch(this.authApi.handleAccessDenied)
 				.then(({data}) => {
 					jobDetailsService.createJob(data);
 				});
 		}
 
+		handleCheckboxDemographic(source) {
+			  const targetSource = this.getSourceKeyInfo(source.sourceKey);
+			  targetSource.viewDemographic(targetSource.viewDemographic());
+			  const restSourceInfos = this.cohortDefinitionSourceInfo().filter(
+				(d) => {
+				  return d.sourceKey !== source.sourceKey;
+				}
+			  );
+
+			  this.cohortDefinitionSourceInfo([...restSourceInfos, targetSource])
+		  }
+
 		cancelGenerate (source) {
 			this.stopping()[source.sourceKey](true);
 			cohortDefinitionService.cancelGenerate(this.currentCohortDefinition().id(), source.sourceKey);
@@ -1261,6 +1286,9 @@ define(['jquery', 'knockout', 'text!./cohort-definition-manager.html',
 				}
 				cdsi.failMessage = ko.observable(sourceInfo.failMessage);
 				cdsi.createdBy = ko.observable(sourceInfo.createdBy);
+				cdsi.viewDemographic = ko.observable(sourceInfo?.viewDemographic || sourceInfo.isChooseDemographic || false);
+				cdsi.tooltipDemographic = ko.observable(sourceInfo?.tooltipDemographic || null);
+				cdsi.ccGenerateId = ko.observable(sourceInfo.ccGenerateId);
 			} else {
 				cdsi.isValid = ko.observable(false);
 				cdsi.isCanceled = ko.observable(false);
@@ -1271,6 +1299,9 @@ define(['jquery', 'knockout', 'text!./cohort-definition-manager.html',
 				cdsi.recordCount = ko.observable('n/a');
 				cdsi.failMessage = ko.observable(null);
 				cdsi.createdBy = ko.observable(null);
+				cdsi.viewDemographic = ko.observable(false);
+				cdsi.tooltipDemographic = ko.observable(null);
+				cdsi.ccGenerateId = ko.observable(null);
 			}
 			return cdsi;
 		}
@@ -1316,6 +1347,23 @@ define(['jquery', 'knockout', 'text!./cohort-definition-manager.html',
 
 		async prepareCohortDefinition(cohortDefinitionId, conceptSetId, selectedSourceId, sourceKey, versionNumber) {
 			this.isLoading(true);
+			ko.bindingHandlers.tooltip = {
+				init: function (element, valueAccessor) {
+					const value = ko.utils.unwrapObservable(valueAccessor());
+					$("[aria-label='Demographics']").attr('data-original-title', 'Results with Demographics').bstooltip({
+						html: true,
+						container:'body',
+					});
+					$(element).attr('data-original-title', value).bstooltip({
+						html: true,
+						container:'body'
+					});
+				},
+				update: function (element, valueAccessor) {
+					const value = ko.utils.unwrapObservable(valueAccessor());
+					$(element).attr('data-original-title', value);
+				}
+			}
 			if(parseInt(cohortDefinitionId) === 0) {
 				this.setNewCohortDefinition();
 			} else if (versionNumber) {
@@ -1348,6 +1396,49 @@ define(['jquery', 'knockout', 'text!./cohort-definition-manager.html',
 			}
 		}
 
+		addToolTipDemographic(source){
+			const targetSource = this.getSourceKeyInfo(source?.sourceKey);
+			targetSource?.tooltipDemographic('Results with Demographics');
+			const restSourceInfos = this.cohortDefinitionSourceInfo().filter(
+				(d) => {
+				  return d.sourceKey !== source?.sourceKey;
+				}
+			  );
+			this.cohortDefinitionSourceInfo([
+				...restSourceInfos,
+				targetSource
+			])
+		}
+
+		removeToolTipDemographic(source){
+			const targetSource = this.getSourceKeyInfo(source?.sourceKey);
+			targetSource?.tooltipDemographic(null);
+			const restSourceInfos = this.cohortDefinitionSourceInfo().filter(
+				(d) => {
+				  return d?.sourceKey !== source?.sourceKey;
+				}
+			  );
+			this.cohortDefinitionSourceInfo([
+				...restSourceInfos,
+				targetSource
+			])
+		}
+
+		handleViewDemographic(source) {
+			const targetSource = this.getSourceKeyInfo(source?.sourceKey);
+			targetSource.viewDemographic(!targetSource.viewDemographic());
+			targetSource?.tooltipDemographic(null);
+			const restSourceInfos = this.cohortDefinitionSourceInfo().filter(
+				(d) => {
+				  return d?.sourceKey !== source?.sourceKey;
+				}
+			  );
+			this.cohortDefinitionSourceInfo([
+				...restSourceInfos,
+				targetSource
+			])
+		}
+
 		checkifDataLoaded(cohortDefinitionId, conceptSetId, sourceKey) {
 			if (this.currentCohortDefinition() && this.currentCohortDefinition().id() == cohortDefinitionId) {
 				if (this.currentConceptSet() && this.currentConceptSet().id == conceptSetId) {

js/pages/cohort-definitions/components/reporting/cohort-reports/cohort-reports.js

@@ -21,7 +21,7 @@ define([
 	PluginRegistry.add(globalConstants.pluginTypes.COHORT_REPORT, {
 		title: ko.i18n('cohortDefinitions.cohortreports.inclusionReport', 'Inclusion Report'),
 		priority: 1,
-		html: `<cohort-report-inclusion params="{ sourceKey: sourceKey, cohortId: cohortId }"></cohort-report-inclusion>`
+		html: `<cohort-report-inclusion params="{ sourceKey: sourceKey, cohortId: cohortId, isViewDemographic: isViewDemographic, ccGenerateId: ccGenerateId }"></cohort-report-inclusion>`
 	});
 
 	class CohortReports extends Component {
@@ -30,18 +30,37 @@ define([
 
 			this.sourceKey = ko.computed(() => params.source() && params.source().sourceKey);
 			this.cohortId = ko.computed(() => params.cohort().id());
-
+			this.isViewDemographic = ko.computed(() => params.source() && params.source().viewDemographic());
+			this.ccGenerateId = ko.computed(() => params.infoSelected() && params.infoSelected().ccGenerateId());
+
 			const componentParams =  {
 				sourceKey: this.sourceKey,
-				cohortId: this.cohortId
+				cohortId: this.cohortId,
+				isViewDemographic: this.isViewDemographic,
+				ccGenerateId: this.ccGenerateId,
 			};
 
 			this.tabs = PluginRegistry.findByType(globalConstants.pluginTypes.COHORT_REPORT).map(t => ({ ...t, componentParams }));
+
+			if (this.isViewDemographic()) {
+				this.tabs.push({
+					title: ko.i18n('cohortDefinitions.cohortreports.tabs.byPerson3', 'Demographics'),
+					componentName: 'demographic-report',
+					componentParams: {
+						...componentParams,
+						reportType: constants.INCLUSION_REPORT.BY_DEMOGRAPHIC,
+						buttons: null,
+						tableDom: "Blfiprt"
+					}
+				});
+			}		
 		}
 
 		dispose() {
 			this.sourceKey.dispose();
 			this.cohortId.dispose();
+			this.isViewDemographic.dispose();
+			this.ccGenerateId.dispose();
 		}
 	}
 

js/pages/cohort-definitions/components/reporting/cohort-reports/const.js

@@ -2,10 +2,18 @@ define([], () => {
     const INCLUSION_REPORT = {
     	BY_EVENT: 0,
     	BY_PERSON: 1,
+      BY_DEMOGRAPHIC: 2
+    };
+
+    const feAnalysisTypes = {
+      PRESET: 'PRESET',
+      CRITERIA_SET: 'CRITERIA_SET',
+      CUSTOM_FE: 'CUSTOM_FE'
     };
 
     return {
-    	INCLUSION_REPORT
+    	INCLUSION_REPORT,
+      feAnalysisTypes
     };
   }
 );

js/pages/cohort-definitions/components/reporting/cohort-reports/conversion/BaseDistributionStatConverter.js

@@ -0,0 +1,86 @@
+define([
+  'knockout',
+    './BaseStatConverter',
+	'./DistributionStat',
+], function (
+    ko,
+    BaseStatConverter,
+	DistributionStat,
+) {
+
+    class BaseDistributionStatConverter extends BaseStatConverter {
+
+        constructor(classes) {
+            super(classes);
+        }
+
+        convertAnalysisToTabularData(analysis, stratas = null) {
+
+            const result = super.convertAnalysisToTabularData(analysis, stratas);
+            stratas && stratas.filter(s => result.data.findIndex(row => row.strataId === s.strataId) < 0)
+              .forEach(s => result.data.push(this.getResultObject(
+                {
+                  analysisId: analysis.analysisId,
+                  analysisName: analysis.analysisName,
+                  domainId: analysis.domainId,
+                  cohorts: [],
+                  strataId: s.strataId,
+                  strataName: s.strataName,
+                }
+              )));
+            return result;
+        }
+
+        getRowId(stat) {
+            return stat.strataId * 100000 + stat.covariateId;
+        }
+
+        getResultObject(stat) {
+            return new DistributionStat(stat);
+        }
+
+        extractStrata(stat) {
+            return { strataId: 0, strataName: '' };
+        }
+
+        getDefaultColumns(analysis) {
+            return [{
+              title: ko.i18n('columns.strata', 'Strata'),
+              data: 'strataName',
+              className: this.classes('col-distr-title'),
+							xssSafe:false,
+            },
+            {
+              title: 'Covariate',
+              data: 'covariateName',
+              className: this.classes('col-distr-cov'),
+              xssSafe: false,
+            },
+            {
+              title: 'Value field',
+              data: (row, type) => {
+                  let data = (row.faType === 'CRITERIA_SET' && row.aggregateName) || "Events count" ;
+                  if (row.missingMeansZero) {
+                      data = data + "*"; 
+                  }
+                  return data;
+              }
+            }];
+        }
+
+        convertFields(result, strataId, cohortId, stat, prefix) {
+            result.strataName = stat.strataName;
+            ['count', 'avg', 'pct', 'stdDev', 'median', 'max', 'min', 'p10', 'p25', 'p75', 'p90'].forEach(field => {
+                const statName = prefix ? prefix + field.charAt(0).toUpperCase() + field.slice(1) : field;
+			    this.setNestedValue(result, field, strataId, cohortId, stat[statName]);
+            });
+        }
+
+        convertCompareFields(result, strataId, stat) {
+            this.convertFields(result, strataId, stat.targetCohortId, stat, "target");
+            this.convertFields(result, strataId, stat.comparatorCohortId, stat, "comparator");
+		}
+    }
+
+    return BaseDistributionStatConverter;
+});