Merge pull request #68 from OHDSI/develop

auto generate website via github actions

.github/workflows/pkgdown.yaml

@@ -0,0 +1,51 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
+on:
+  push:
+    branches: [main, develop]
+  release:
+    types: [published]
+  workflow_dispatch:
+
+name: pkgdown
+
+jobs:
+  pkgdown:
+    runs-on: ubuntu-latest
+    # Only restrict concurrency for non-PR jobs
+    concurrency:
+      group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          cache: always
+          extra-packages: any::pkgdown, ohdsi/OhdsiRTools
+          needs: website
+
+      - uses: lycheeverse/lychee-action@v2
+        with:
+          args: --base . --verbose --no-progress --accept '100..=103, 200..=299, 403' './**/*.md' './**/*.Rmd'
+
+      - name: Build site
+        run: Rscript -e 'pkgdown::build_site_github_pages(new_process = FALSE, install = TRUE)'
+
+      - name: Fix Hades Logo
+        run: Rscript -e 'OhdsiRTools::fixHadesLogo()'
+
+      - name: Deploy to GitHub pages 🚀
+        if: github.event_name != 'pull_request'
+        uses: JamesIves/github-pages-deploy-action@v4
+        with:
+          clean: false
+          branch: gh-pages
+          folder: docs

_pkgdown.yml

@@ -1,6 +1,12 @@
 template:
+  bootstrap: 5
   params:
     bootswatch: cosmo
+  light-switch: false
+
+development:
+  mode: auto
+  development: docs/dev
 
 home:
   links:
@@ -9,29 +15,27 @@ home:
 
 navbar:
   structure:
-    left:
-    - home
-    - intro
-    - reference
-    - articles
-    - news
+    left: [home, intro, reference, articles, news]
     right: [hades, github]
   components:
     home:
       icon: fa-home fa-lg
       href: index.html
     reference:
+      icon: fa-info-circle fa-lg
       text: Reference
       href: reference/index.html
     intro:
+      icon: fa-download fa-lg
       text: Get started
       href: articles/InstallationGuide.html
     news:
+      icon: fa-newspaper-o fa-lg
       text: Changelog
       href: news/index.html
     github:
       icon: fa-github fa-lg
-      href: https://github.com/OHDSI/PatientLevelPrediction
+      href: https://github.com/OHDSI/Characterization
     hades:
       text: hadesLogo
       href: https://ohdsi.github.io/Hades