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Add appli entry-point to new dockerfile
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FROM rocker/r-ver:4.0.5 | ||
FROM rocker/r-ver:4.0.5 | ||
# -> ubuntu 20.04 | ||
# -> don't use latest R release, since that will keep getting linked with later build-dates and RStudio packagemanager | ||
# -> sets repository to RStudio packagemanager for specific build date of R version, being 2021-05-17 for R 4.0.5 | ||
# (see https://github.com/rocker-org/rocker-versioned2/blob/master/dockerfiles/r-ver_4.0.5.Dockerfile for reference) | ||
# -> installs R to /usr/local/lib/R | ||
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RUN apt-get update && apt-get upgrade -y && \ | ||
apt-get install -y --no-install-recommends libnode-dev libcairo2-dev libxt-dev libcurl4-gnutls-dev libssl-dev libssh2-1-dev libxml2-dev apt-utils libjq-dev gdal-bin proj-bin libgdal-dev libudunits2-dev && \ | ||
# if desired, add tools such as: sudo, vim, wget, curl, procps | ||
# library necessary for dependency of geojsonio | ||
apt-get install -y libprotobuf-dev protobuf-compiler && \ | ||
apt-get install -y tzdata && \ | ||
rm -rf /var/lib/apt/lists/* | ||
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# libcairo2-dev and libxt-dev needed for Cairo, e.g. graphics | ||
# libcurl4-openssl-dev and libcurl4-gnutls-dev are mutually exclusive. we choose GNU TLS, which seems preferred on Ubuntu / Debian systems and is recommended e.g. by RStudio | ||
# libssl-dev depends on libssl1.1, which in turn depends on libc6 | ||
# (libcurl4-openssl-dev / openssl would depend on libc6 and libssl1.1 as well) | ||
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# Install Oasisui with dependencies | ||
ARG REF_BRANCH | ||
ENV REF_BRANCH=${REF_BRANCH:-master} | ||
RUN R -e "install.packages('remotes')" && \ | ||
# installing older version of package shinyjs from GitHub | ||
R -e "remotes::install_github('daattali/shinyjs', ref = 'v1.1', upgrade = 'always')" && \ | ||
R -e "remotes::install_github('OasisLMF/OasisUI', ref = '${REF_BRANCH}', subdir = 'BFE_RShiny/oasisui')" && \ | ||
rm -rf /var/lib/apt/lists/* | ||
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# Create the logging directory | ||
RUN mkdir /var/log/shiny-server | ||
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# Make root directory | ||
RUN mkdir -p /root | ||
WORKDIR /root | ||
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# Add shiny options upon startup | ||
COPY shinyproxy/Rprofile.site /usr/local/lib/R/etc/ | ||
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# Set port | ||
EXPOSE 3838 | ||
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# Use below for stand-alone build, i.e. without shinyproxy | ||
# ARG API_IP_CMD_RES | ||
# ENV API_IP=${API_IP_CMD_RES:-0.0.0.0} | ||
# ENV API_PORT=8000 | ||
# ENV API_VERSION=v1 | ||
# ENV API_SHARE_FILEPATH=./downloads | ||
# ENV OASIS_ENVIRONMENT=oasis_localhost | ||
# ENV MAX_UPLOAD_SIZE=500 | ||
# ENV HIDE_FOOTER_VERSION=TRUE | ||
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# Launch Oasisui | ||
CMD ["R", "-e", "oasisui::runOasisui(mode="appli")"] |