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fix ftp host for RGD URLs; refs #69
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Anthony Bargnesi committed Apr 19, 2016
1 parent cbd4ace commit 6782dce
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Showing 2 changed files with 4 additions and 4 deletions.
6 changes: 3 additions & 3 deletions configuration.py
Original file line number Diff line number Diff line change
Expand Up @@ -71,19 +71,19 @@

rgd_data = RGDData()
baseline_data['rgd.txt'] = (
'ftp://rgd.mcw.edu/pub/data_release/GENES_RAT.txt',
'ftp://ftp.rgd.mcw.edu/pub/data_release/GENES_RAT.txt',
parsers.RGDParser, rgd_data
)

rgd_history_data = RGDObsoleteData()
baseline_data['rgd_obsolete.txt'] = (
'ftp://rgd.mcw.edu/pub/data_release/GENES_OBSOLETE_IDS.txt',
'ftp://ftp.rgd.mcw.edu/pub/data_release/GENES_OBSOLETE_IDS.txt',
parsers.RGDObsoleteParser,
rgd_history_data)

rgd_ortho_data = OrthologyData(prefix='rgd')
baseline_data['RGD_ORTHOLOGS.txt'] = (
'ftp://rgd.mcw.edu/pub/data_release/RGD_ORTHOLOGS.txt',
'ftp://ftp.rgd.mcw.edu/pub/data_release/RGD_ORTHOLOGS.txt',
parsers.RGDOrthologParser,
rgd_ortho_data)

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2 changes: 1 addition & 1 deletion orthology.py
Original file line number Diff line number Diff line change
Expand Up @@ -147,7 +147,7 @@ def get_egid_status(egid):
ortho.write(s + '\n')
ortho.write('\n')
ortho.write(
'SET Citation = {"Online Resource","RGD Orthology FTP file", "ftp://rgd.mcw.edu/pub/data_release/RGD_ORTHOLOGS.txt"}\n')
'SET Citation = {"Online Resource","RGD Orthology FTP file", "ftp://ftp.rgd.mcw.edu/pub/data_release/RGD_ORTHOLOGS.txt"}\n')
for s in sorted(rgd_ortho_statements):
ortho.write(s + '\n')
ortho.write('\n')
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