Fix concurrency issue with NodePeer update #7546
Workflow file for this run
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| name: PR Tests - Syft | |
| on: | |
| workflow_call: | |
| pull_request: | |
| branches: | |
| - dev | |
| - main | |
| - "0.8" | |
| workflow_dispatch: | |
| inputs: | |
| none: | |
| description: "Run Tests Manually" | |
| required: false | |
| concurrency: | |
| group: syft-${{ github.event_name == 'pull_request' && format('{0}-{1}', github.workflow, github.event.pull_request.number) || github.workflow_ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| pr-tests-syft-unit: | |
| strategy: | |
| max-parallel: 99 | |
| matrix: | |
| os: [ubuntu-latest, macos-latest, windows-latest] | |
| python-version: ["3.12"] | |
| include: | |
| - python-version: "3.11" | |
| os: "ubuntu-latest" | |
| - python-version: "3.10" | |
| os: "ubuntu-latest" | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| # - name: Permission to home directory | |
| # if: matrix.os == 'ubuntu-latest' | |
| # run: | | |
| # sudo chown -R $USER:$USER $HOME | |
| - name: "clean .git/config" | |
| if: matrix.os == 'windows-latest' | |
| continue-on-error: true | |
| shell: bash | |
| run: | | |
| echo "deleting ${GITHUB_WORKSPACE}/.git/config" | |
| rm ${GITHUB_WORKSPACE}/.git/config | |
| - uses: actions/checkout@v4 | |
| - name: Check for file changes | |
| uses: dorny/paths-filter@v3 | |
| id: changes | |
| with: | |
| base: ${{ github.ref }} | |
| token: ${{ github.token }} | |
| filters: .github/file-filters.yml | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| if: steps.changes.outputs.syft == 'true' | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Upgrade pip | |
| if: steps.changes.outputs.syft == 'true' | |
| run: | | |
| pip install --upgrade pip uv==0.1.35 | |
| uv --version | |
| - name: Get pip cache dir | |
| id: pip-cache | |
| if: steps.changes.outputs.syft == 'true' | |
| shell: bash | |
| run: | | |
| echo "dir=$(uv cache dir)" >> $GITHUB_OUTPUT | |
| - name: pip cache | |
| uses: actions/cache@v4 | |
| if: steps.changes.outputs.syft == 'true' | |
| with: | |
| path: ${{ steps.pip-cache.outputs.dir }} | |
| key: ${{ runner.os }}-uv-py${{ matrix.python-version }}-${{ hashFiles('setup.cfg') }} | |
| restore-keys: | | |
| ${{ runner.os }}-uv-py${{ matrix.python-version }}- | |
| # - name: Docker on MacOS | |
| # if: steps.changes.outputs.syft == 'true' && matrix.os == 'macos-latest' | |
| # uses: crazy-max/[email protected] | |
| # with: | |
| # set-host: true | |
| - name: Install Dependencies | |
| if: steps.changes.outputs.syft == 'true' | |
| run: | | |
| pip install --upgrade tox tox-uv==1.5.1 | |
| - name: Run unit tests | |
| if: steps.changes.outputs.syft == 'true' | |
| run: | | |
| tox -e syft.test.unit | |
| tox -e seaweedfs.test.unit | |
| pr-tests-syft-notebook-python: | |
| strategy: | |
| max-parallel: 99 | |
| matrix: | |
| # Disable on windows until its flakyness is reduced. | |
| # os: [ubuntu-latest, macos-latest, windows-latest] | |
| os: [ubuntu-latest, macos-latest] | |
| python-version: ["3.12"] | |
| deployment-type: ["python"] | |
| notebook-paths: ["tutorials"] | |
| bump-version: ["False"] | |
| include: | |
| - python-version: "3.11" | |
| os: "ubuntu-latest" | |
| deployment-type: "python" | |
| notebook-paths: "tutorials" | |
| - python-version: "3.10" | |
| os: "ubuntu-latest" | |
| deployment-type: "python" | |
| notebook-paths: "tutorials" | |
| - python-version: "3.12" | |
| os: "ubuntu-latest" | |
| deployment-type: "python" | |
| notebook-paths: "tutorials" | |
| bump-version: "True" | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| # - name: Permission to home directory | |
| # if: matrix.os == 'ubuntu-latest' | |
| # run: | | |
| # sudo chown -R $USER:$USER $HOME | |
| - name: "clean .git/config" | |
| if: matrix.os == 'windows-latest' | |
| continue-on-error: true | |
| shell: bash | |
| run: | | |
| echo "deleting ${GITHUB_WORKSPACE}/.git/config" | |
| rm ${GITHUB_WORKSPACE}/.git/config | |
| - uses: actions/checkout@v4 | |
| - name: Check for file changes | |
| uses: dorny/paths-filter@v3 | |
| id: changes | |
| with: | |
| base: ${{ github.ref }} | |
| token: ${{ github.token }} | |
| filters: .github/file-filters.yml | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| if: steps.changes.outputs.syft == 'true' || steps.changes.outputs.notebooks == 'true' | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Upgrade pip | |
| if: steps.changes.outputs.syft == 'true' || steps.changes.outputs.notebooks == 'true' | |
| run: | | |
| pip install --upgrade pip uv==0.1.35 | |
| uv --version | |
| - name: Get pip cache dir | |
| id: pip-cache | |
| if: steps.changes.outputs.syft == 'true' || steps.changes.outputs.notebooks == 'true' | |
| shell: bash | |
| run: | | |
| echo "dir=$(uv cache dir)" >> $GITHUB_OUTPUT | |
| - name: pip cache | |
| uses: actions/cache@v4 | |
| if: steps.changes.outputs.syft == 'true' || steps.changes.outputs.notebooks == 'true' | |
| with: | |
| path: ${{ steps.pip-cache.outputs.dir }} | |
| key: ${{ runner.os }}-uv-py${{ matrix.python-version }}-${{ hashFiles('setup.cfg') }} | |
| restore-keys: | | |
| ${{ runner.os }}-uv-py${{ matrix.python-version }}- | |
| - name: Install Dependencies | |
| if: steps.changes.outputs.syft == 'true' || steps.changes.outputs.notebooks == 'true' | |
| run: | | |
| pip install --upgrade tox tox-uv==1.5.1 | |
| - name: Run notebook tests | |
| uses: nick-fields/retry@v3 | |
| if: steps.changes.outputs.syft == 'true' || steps.changes.outputs.notebooks == 'true' | |
| env: | |
| ORCHESTRA_DEPLOYMENT_TYPE: "${{ matrix.deployment-type }}" | |
| TEST_NOTEBOOK_PATHS: "${{ matrix.notebook-paths }}" | |
| BUMP_VERSION: "${{ matrix.bump-version }}" | |
| with: | |
| timeout_seconds: 2400 | |
| max_attempts: 3 | |
| command: tox -e syft.test.notebook | |
| pr-tests-syft-notebook-single-container: | |
| strategy: | |
| max-parallel: 99 | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ["3.10", "3.11", "3.12"] | |
| deployment-type: ["remote"] | |
| notebook-paths: ["api/0.8"] | |
| fail-fast: false | |
| runs-on: ${{matrix.os}} | |
| steps: | |
| # - name: Permission to home directory | |
| # if: matrix.os == 'ubuntu-latest' | |
| # run: | | |
| # sudo chown -R $USER:$USER $HOME | |
| - uses: actions/checkout@v4 | |
| # free 10GB of space | |
| - name: Remove unnecessary files | |
| if: matrix.os == 'ubuntu-latest' | |
| run: | | |
| sudo rm -rf /usr/share/dotnet | |
| sudo rm -rf "$AGENT_TOOLSDIRECTORY" | |
| docker image prune --all --force | |
| docker builder prune --all --force | |
| docker system prune --all --force | |
| - name: Check for file changes | |
| uses: dorny/paths-filter@v3 | |
| id: changes | |
| with: | |
| base: ${{ github.ref }} | |
| token: ${{ github.token }} | |
| filters: .github/file-filters.yml | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| if: steps.changes.outputs.stack == 'true' || steps.changes.outputs.notebooks == 'true' | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Upgrade pip | |
| if: steps.changes.outputs.stack == 'true' || steps.changes.outputs.notebooks == 'true' | |
| run: | | |
| pip install --upgrade pip uv==0.1.35 | |
| uv --version | |
| - name: Get pip cache dir | |
| id: pip-cache | |
| if: steps.changes.outputs.stack == 'true' || steps.changes.outputs.notebooks == 'true' | |
| shell: bash | |
| run: | | |
| echo "dir=$(uv cache dir)" >> $GITHUB_OUTPUT | |
| - name: pip cache | |
| uses: actions/cache@v4 | |
| if: steps.changes.outputs.stack == 'true' || steps.changes.outputs.notebooks == 'true' | |
| with: | |
| path: ${{ steps.pip-cache.outputs.dir }} | |
| key: ${{ runner.os }}-uv-py${{ matrix.python-version }}-${{ hashFiles('setup.cfg') }} | |
| restore-keys: | | |
| ${{ runner.os }}-uv-py${{ matrix.python-version }}- | |
| - name: Install Dependencies | |
| if: steps.changes.outputs.stack == 'true' || steps.changes.outputs.notebooks == 'true' | |
| run: | | |
| pip install --upgrade tox tox-uv==1.5.1 | |
| - name: Docker Compose on Linux | |
| if: (steps.changes.outputs.stack == 'true' || steps.changes.outputs.notebooks == 'true') && matrix.os == 'ubuntu-latest' | |
| shell: bash | |
| run: | | |
| mkdir -p ~/.docker/cli-plugins | |
| DOCKER_COMPOSE_VERSION=v2.21.0 | |
| curl -sSL https://github.com/docker/compose/releases/download/${DOCKER_COMPOSE_VERSION}/docker-compose-linux-x86_64 -o ~/.docker/cli-plugins/docker-compose | |
| chmod +x ~/.docker/cli-plugins/docker-compose | |
| docker compose version | |
| - name: Docker on MacOS | |
| if: (steps.changes.outputs.stack == 'true' || steps.changes.outputs.notebooks == 'true') && matrix.os == 'macos-latest' | |
| uses: crazy-max/[email protected] | |
| - name: Docker Compose on MacOS | |
| if: (steps.changes.outputs.stack == 'true' || steps.changes.outputs.notebooks == 'true') && matrix.os == 'macos-latest' | |
| shell: bash | |
| run: | | |
| brew install docker-compose | |
| mkdir -p ~/.docker/cli-plugins | |
| ln -sfn /usr/local/opt/docker-compose/bin/docker-compose ~/.docker/cli-plugins/docker-compose || true | |
| docker compose version | |
| - name: Docker on Windows | |
| if: (steps.changes.outputs.stack == 'true' || steps.changes.outputs.notebooks == 'true') && matrix.os == 'windows-latest' | |
| shell: pwsh | |
| run: | | |
| [Net.ServicePointManager]::SecurityProtocol = [Net.SecurityProtocolType]::Tls12 | |
| Start-BitsTransfer -Source "https://download.docker.com/win/static/stable/x86_64/docker-23.0.1.zip" | |
| Expand-Archive docker-23.0.1.zip -DestinationPath $Env:ProgramFiles | |
| &$Env:ProgramFiles\Docker\dockerd --register-service | |
| Start-Service docker | |
| docker version | |
| docker compose version | |
| - name: Run unit tests | |
| if: steps.changes.outputs.stack == 'true' || steps.changes.outputs.notebooks == 'true' | |
| env: | |
| ORCHESTRA_DEPLOYMENT_TYPE: "${{ matrix.deployment-type }}" | |
| DEV_MODE: "True" # force orchestra --build | |
| TEST_NOTEBOOK_PATHS: "${{ matrix.notebook-paths }}" | |
| run: | | |
| tox -e single_container.launch | |
| tox -e stack.test.notebook | |
| tox -e single_container.destroy | |
| pr-tests-syft-security: | |
| strategy: | |
| max-parallel: 1 | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ["3.12"] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| # - name: Permission to home directory | |
| # if: matrix.os == 'ubuntu-latest' | |
| # run: | | |
| # sudo chown -R $USER:$USER $HOME | |
| - uses: actions/checkout@v4 | |
| - name: Check for file changes | |
| uses: dorny/paths-filter@v3 | |
| id: changes | |
| with: | |
| base: ${{ github.ref }} | |
| token: ${{ github.token }} | |
| filters: .github/file-filters.yml | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| if: steps.changes.outputs.syft == 'true' | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Upgrade pip | |
| if: steps.changes.outputs.syft == 'true' | |
| run: | | |
| pip install --upgrade pip uv==0.1.35 | |
| uv --version | |
| - name: Get pip cache dir | |
| if: steps.changes.outputs.syft == 'true' | |
| id: pip-cache | |
| shell: bash | |
| run: | | |
| echo "dir=$(uv cache dir)" >> $GITHUB_OUTPUT | |
| - name: pip cache | |
| uses: actions/cache@v4 | |
| if: steps.changes.outputs.syft == 'true' | |
| with: | |
| path: ${{ steps.pip-cache.outputs.dir }} | |
| key: ${{ runner.os }}-uv-py${{ matrix.python-version }}-${{ hashFiles('setup.cfg') }} | |
| restore-keys: | | |
| ${{ runner.os }}-uv-py${{ matrix.python-version }}- | |
| - name: Install Dependencies | |
| if: steps.changes.outputs.syft == 'true' | |
| run: | | |
| pip install --upgrade tox tox-uv==1.5.1 | |
| - name: Scan for security issues | |
| if: steps.changes.outputs.syft == 'true' | |
| run: | | |
| tox -e syft.test.security |