More adding of spikeThresh #31
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name: Continuous build using OMV | |
on: | |
push: | |
branches: [ master, development, experimental ] | |
pull_request: | |
branches: [ master, development, experimental ] | |
jobs: | |
build: | |
name: Py${{ matrix.python-version }}, ${{ matrix.engine}} on ${{ matrix.runs-on }} | |
runs-on: ${{ matrix.runs-on }} | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: [ "3.10" ] | |
engine: [ NEURON, jNeuroML, jNeuroML_NEURON, jNeuroML_NetPyNE, jNeuroML_EDEN, jNeuroML_validate ] | |
runs-on: [ubuntu-latest, macos-latest ] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install HDF5 for pytables on macos-latest | |
if: ${{ matrix.runs-on == 'macos-latest' }} | |
run: | | |
brew install hdf5 | |
- name: Install OMV | |
run: | | |
pip install git+https://github.com/OpenSourceBrain/osb-model-validation | |
pip install scipy sympy matplotlib cython pandas tables | |
pip install 'numpy<=1.23.0' # see https://github.com/OpenSourceBrain/osb-model-validation/issues/91 | |
- name: Run OMV tests on engine ${{ matrix.engine }} | |
run: | | |
omv all -V --engine=${{ matrix.engine }} | |
- name: OMV final version info | |
run: | | |
omv list -V # list installed engines | |
env |