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Add Dockerfile and docker-compose.yml #17

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@OriginalByteMe OriginalByteMe commented Nov 25, 2023

Dockerizing the app to be able to run on a local system instead of just on modal

Summary by CodeRabbit

  • New Features

    • Introduced a containerized application setup with a new Dockerfile.
    • Added a new dummy_modal.py module to handle various application functionalities.
    • Created a new API endpoint / that returns a greeting message.
  • Bug Fixes

    • Adjusted the sam_checkpoint_path parameter to use the correct path in create_all_cutouts function.
  • Documentation

    • Provided comments and documentation within the new dummy_modal.py module for clarity.
  • Refactor

    • Implemented a dummy modal package to prevent errors related to modal operations.

@OriginalByteMe OriginalByteMe self-assigned this Nov 25, 2023
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Walkthrough

The changes involve updating a Dockerfile for a containerized application that now builds upon an NVIDIA PyTorch image, setting up the environment, and installing dependencies. A new Python module dummy_modal.py is added with various classes and decorator functions, likely to mock or stub out functionality. The grounded_cutouts.py file sees the addition of a simple root endpoint and an update to a function parameter, suggesting a shift to a different model checkpoint for processing.

Changes

File(s) Change Summary
Dockerfile Updated to use NVIDIA PyTorch image, install packages, set environment, and define entrypoint with uvicorn.
app/dummy_modal.py Added module with classes (Stub, Secret, Mount, Image) and decorator functions (asgi_app, method).
app/.../grounded_cutouts.py Added root endpoint and updated sam_checkpoint_path parameter in create_all_cutouts function.

🐇✨
In the realm of code where the data bunnies hop,
A Dockerfile changed, a container on top.
With NVIDIA's might and PyTorch's bright flame,
We build and we run, in the AI game.

A dummy module springs, with stubs in a row,
Secrets and mounts, and images that glow.
Decorators twirl, in a Pythonic dance,
Mocking the methods with a crafted glance.

And in cutouts land, where the endpoints grow,
"Hello world!" now greets, with a friendly hello.
A checkpoint shifts, from high to low,
For AI to learn, and for models to know.

So here's to the changes, the tweaks, and the fix,
In the burrow of bytes, where the code rabbits mix.
With each commit push, and each pull request,
We hop towards progress, and code at our best. 🌟🚀

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Review Status

Actionable comments generated: 0

Configuration used: CodeRabbit UI

Commits Files that changed from the base of the PR and between 5f019b0 and eeede38.
Files ignored due to filter (1)
  • docker-compose.yml
Files selected for processing (3)
  • Dockerfile (1 hunks)
  • app/dummy_modal.py (1 hunks)
  • app/grounded_cutouts.py (3 hunks)
Files skipped from review due to trivial changes (1)
  • Dockerfile
Additional comments: 2
app/grounded_cutouts.py (2)
  • 219-226: The new root endpoint / is correctly implemented and follows FastAPI conventions. It's a simple endpoint that returns a "Hello world!" message, which can be useful for health checks or verifying that the service is up and running.

  • 325-329: The create_all_cutouts function has been updated to use SAM_CHECKPOINT_PATH_LOW instead of SAM_CHECKPOINT_PATH. This change should be verified to ensure that it aligns with the intended use case, as it may affect the performance and accuracy of the model being used.

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@CodiumAI-Agent /review

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PR Analysis

  • 🎯 Main theme: Dockerizing the application and making it more modular
  • 📝 PR summary: This PR dockerizes the application and makes it more modular to be usable on other platforms. It introduces a Dockerfile and docker-compose.yml for containerization. It also adds a new dummy_modal.py module to handle various application functionalities and creates a new API endpoint.
  • 📌 Type of PR: Enhancement
  • 🧪 Relevant tests added: No
  • ⏱️ Estimated effort to review [1-5]: 3, because the PR involves changes in multiple files and introduces new functionalities. However, the changes are straightforward and well-documented.
  • 🔒 Security concerns: Yes, because the AWS keys are hardcoded in the docker-compose file which can lead to exposure of sensitive information.

PR Feedback

  • 💡 General suggestions: The PR is well-structured and the changes are well-documented. However, it would be better to add tests to ensure the new functionalities work as expected. Also, it's recommended to add a newline at the end of each file to follow the best practices.

  • 🤖 Code feedback:
    relevant fileDockerfile
    suggestion      Consider using multi-stage builds to make your Dockerfile more efficient and the resulting image smaller. This can be done by separating the build stage and the runtime stage. [important]
    relevant lineFROM nvcr.io/nvidia/pytorch:22.12-py3

    relevant filedocker-compose.yml
    suggestion      It's not a good practice to hardcode sensitive information like AWS keys in the docker-compose file. Consider using environment variables or secrets management tools. [important]
    relevant line- AWS_ACCESS_KEY_ID=your_access_key

    relevant fileapp/dummy_modal.py
    suggestion      It's a good practice to add docstrings to your classes and methods to explain their purpose and usage. [medium]
    relevant lineclass Stub:

    relevant fileapp/grounded_cutouts.py
    suggestion      Consider handling exceptions in your API endpoints to provide more informative error messages to the users. [medium]
    relevant line@app.get("/")

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@CodiumAI-Agent /add docs

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How to use PR-Agent

Tag me in a comment '@CodiumAI-Agent' and add one of the following commands:
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/describe: Update the PR title and description based on the contents of the PR.
/improve [--extended]: Suggest code improvements. Extended mode provides a higher quality feedback.
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To list the possible configuration parameters, add a /config comment.

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@CodiumAI-Agent /improve

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PR Code Suggestions

💡 Suggestion:

The decorator functions in the Stub class are identical. Consider refactoring them into a single function.

File: app/dummy_modal.py (2-19)

Example code:

Existing code:

class Stub:
    def __init__(self, *args, **kwargs):
        pass

    def cls(self, *args, **kwargs):
        def decorator(cls):
            return cls
        return decorator

    def local_entrypoint(self, *args, **kwargs):
        def decorator(func):
            return func
        return decorator

    def function(self, *args, **kwargs):
        def decorator(func):
            return func
        return decorator

Improved code:

class Stub:
    def __init__(self, *args, **kwargs):
        pass

    def decorator(self, *args, **kwargs):
        def decorator(func):
            return func
        return decorator

    cls = decorator
    local_entrypoint = decorator
    function = decorator

💡 Suggestion:

Consider using multi-stage builds to reduce the size of the final Docker image.

File: Dockerfile (1-26)

Example code:

Existing code:

# Use an official NVIDIA PyTorch runtime as a parent image
FROM nvcr.io/nvidia/pytorch:22.12-py3

# Add the current directory contents into the container
ADD /app .
# Install any needed packages
RUN apt-get update && \
    apt-get install -y git wget libgl1-mesa-glx libglib2.0-0 && \
    echo $CUDA_HOME && \
    git clone https://github.com/IDEA-Research/GroundingDINO.git && \
    pip install -q -e GroundingDINO/ && \
    pip install uvicorn && \
    mkdir -p app/weights && \
    mkdir -p app/data && \
    pip uninstall -y supervision && \
    pip uninstall -y opencv-python && \
    pip install opencv-python==4.8.0.74 && \
    pip install -q supervision==0.6.0 && \
    wget -q https://github.com/IDEA-Research/GroundingDINO/releases/download/v0.1.0-alpha/groundingdino_swint_ogc.pth -P app/weights/ && \
    wget -q https://dl.fbaipublicfiles.com/segment_anything/sam_vit_h_4b8939.pth -P app/weights/ && \
    wget -q https://dl.fbaipublicfiles.com/segment_anything/sam_vit_l_0b3195.pth -P app/weights/ && \
    wget -q https://dl.fbaipublicfiles.com/segment_anything/sam_vit_b_01ec64.pth -P app/weights/ && \
    wget -q https://media.roboflow.com/notebooks/examples/dog.jpeg -P app/images/ 

Improved code:

# Use an official NVIDIA PyTorch runtime as a parent image
FROM nvcr.io/nvidia/pytorch:22.12-py3 as builder

# Add the current directory contents into the container
ADD /app .

# Install any needed packages
RUN apt-get update && \
    apt-get install -y git wget libgl1-mesa-glx libglib2.0-0 && \
    echo $CUDA_HOME && \
    git clone https://github.com/IDEA-Research/GroundingDINO.git && \
    pip install -q -e GroundingDINO/ && \
    pip install uvicorn && \
    mkdir -p app/weights && \
    mkdir -p app/data && \
    pip uninstall -y supervision && \
    pip uninstall -y opencv-python && \
    pip install opencv-python==4.8.0.74 && \
    pip install -q supervision==0.6.0 && \
    wget -q https://github.com/IDEA-Research/GroundingDINO/releases/download/v0.1.0-alpha/groundingdino_swint_ogc.pth -P app/weights/ && \
    wget -q https://dl.fbaipublicfiles.com/segment_anything/sam_vit_h_4b8939.pth -P app/weights/ && \
    wget -q https://dl.fbaipublicfiles.com/segment_anything/sam_vit_l_0b3195.pth -P app/weights/ && \
    wget -q https://dl.fbaipublicfiles.com/segment_anything/sam_vit_b_01ec64.pth -P app/weights/ && \
    wget -q https://media.roboflow.com/notebooks/examples/dog.jpeg -P app/images/ 

FROM nvcr.io/nvidia/pytorch:22.12-py3

COPY --from=builder /app /app

💡 Suggestion:

Consider using COPY instead of ADD for better transparency and to avoid unexpected behavior.

File: Dockerfile (7-8)

Example code:

Existing code:

# Add the current directory contents into the container
ADD /app .

Improved code:

# Copy the current directory contents into the container
COPY ./app /app

💡 Suggestion:

Consider using environment variables for sensitive data instead of hardcoding them in the docker-compose file.

File: docker-compose.yml (12-16)

Example code:

Existing code:

environment:
  - AWS_ACCESS_KEY_ID=your_access_key
  - AWS_SECRET_ACCESS_KEY=your_secret_key
  - AWS_REGION=your_region
  - CUTOUT_BUCKET=your_bucket

Improved code:

environment:
  - AWS_ACCESS_KEY_ID=${AWS_ACCESS_KEY_ID}
  - AWS_SECRET_ACCESS_KEY=${AWS_SECRET_ACCESS_KEY}
  - AWS_REGION=${AWS_REGION}
  - CUTOUT_BUCKET=${CUTOUT_BUCKET}

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@CodiumAI-Agent /add_docs

@@ -0,0 +1,50 @@
# dummy_modal.py
class Stub:
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Suggestion: Proposed documentation

Suggested change
class Stub:
class Stub:
"""
This is a stub class that provides dummy implementations for various methods.
"""

return func
return decorator

class Secret:
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Suggestion: Proposed documentation

Suggested change
class Secret:
class Secret:
"""
This is a Secret class that provides a static method 'from_name'.
"""

def from_name(*args, **kwargs):
pass

class Mount:
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Suggestion: Proposed documentation

Suggested change
class Mount:
class Mount:
"""
This is a Mount class that provides a static method 'from_local_python_packages'.
"""

def from_local_python_packages(*args, **kwargs):
pass

class Image:
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Suggestion: Proposed documentation

Suggested change
class Image:
class Image:
"""
This is an Image class that provides static and instance methods for handling images.
"""

def run_commands(self, *args, **kwargs):
return self

def asgi_app(*args, **kwargs):
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Suggestion: Proposed documentation

Suggested change
def asgi_app(*args, **kwargs):
def asgi_app(*args, **kwargs):
"""
This is a decorator function 'asgi_app' that returns the function it decorates.
"""

return func
return decorator

def method(*args, **kwargs):
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Suggestion: Proposed documentation

Suggested change
def method(*args, **kwargs):
def method(*args, **kwargs):
"""
This is a decorator function 'method' that returns the function it decorates.
"""

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@CodiumAI-Agent /describe

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@CodiumAI-Agent /update_changelog

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@CodiumAI-Agent /generate_labels

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