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sequence_dealing

common bioinformatic scripts

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Name		Name	Last commit message	Last commit date
Latest commit History 53 Commits
add_filename_to_fasta_header		add_filename_to_fasta_header
codon_to_aa		codon_to_aa
concatenate_all_fasta_format_gene_matrix		concatenate_all_fasta_format_gene_matrix
concatenate_two_fasta_format_gene_matrix		concatenate_two_fasta_format_gene_matrix
extract_assigned_files_based_on_filenames_in_list		extract_assigned_files_based_on_filenames_in_list
extract_polymorphic_and_constant_sites		extract_polymorphic_and_constant_sites
extract_sequences_from_fasta_matrix_based_on_headers		extract_sequences_from_fasta_matrix_based_on_headers
extract_sequences_from_gb_files		extract_sequences_from_gb_files
generate_gene_matrix_from_one_fasta_file		generate_gene_matrix_from_one_fasta_file
generate_partitionfinder_format_from_gene_matrix		generate_partitionfinder_format_from_gene_matrix
get_directory_names		get_directory_names
get_mVISTA_format_from_GenBank_annotation		get_mVISTA_format_from_GenBank_annotation
remove_duplicated_sequences_from_same_fasta_file		remove_duplicated_sequences_from_same_fasta_file
remove_gap_from_matrix		remove_gap_from_matrix
remove_noncodon_nucleotides_from_matrix		remove_noncodon_nucleotides_from_matrix
rename_file_in_each_dir_and_copy_to_one_dir		rename_file_in_each_dir_and_copy_to_one_dir
split_file_based_on_same_content_in_column		split_file_based_on_same_content_in_column
README.md		README.md