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Some scores such as PGS002725 are enormous and would have many highly correlated SNPs. Does PGSC Calc do any pruning? |
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Answered by
smlmbrt
May 29, 2024
Replies: 1 comment
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No, the methods used to select the variants and determine their weights handle the correlated SNP effects and linkage disequilibrium themselves. |
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smlmbrt
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No, the methods used to select the variants and determine their weights handle the correlated SNP effects and linkage disequilibrium themselves.