Rename r.abin to run.abin.sh

[danielhollas]

I would like to rename r.abin and similar scripts, since the name can be a bit weird to newcommers. For now I decided for run.abin.sh, but I would love to hear feedback on the naming!

Closes #146.
Closes #196

[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 92.84%. Comparing base (5e79a24) to head (361377c).
Report is 5 commits behind head on master.

Additional details and impacted files

@@            Coverage Diff             @@
##           master     #191      +/-   ##
==========================================
+ Coverage   92.76%   92.84%   +0.07%     
==========================================
  Files          47       47              
  Lines        6693     6760      +67     
  Branches      757      764       +7     
==========================================
+ Hits         6209     6276      +67     
  Misses        472      472              
  Partials       12       12              

Flag	Coverage Δ
unittests	20.37% <ø> (-0.23%)	⬇️

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see 3 files with indirect coverage changes

[JanosJiri]

Renaming r.abin seems like a good idea. I would maybe use run.terachem_mpi_abin.sh instead of run.tc_mpi_abin.sh. Not everyone will know that tc means terachem.

[danielhollas]

I would maybe use run.terachem_mpi_abin.sh instead of run.tc_mpi_abin.sh. Not everyone will know that tc means terachem.

Agreed, I've renamed them based on your suggestion. I've also resolved issues reported in #196