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Releases: PNNL-Comp-Mass-Spec/Mzid-To-Tsv-Converter

Release 1.5.1

11 Jan 01:22
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File MzidToTsvConverter.zip has MzidToTsvConverter.exe for .NET 4.6.2 (and above) and NET 6 (and above).

  • See the Readme file for usage information
  • See batch file Convert_mzid.bat for example commands

This is a console-only program; run it from the Windows command prompt.

On Linux, use Mono to run the program, for example mono MzidToTsvConverter.exe

Changes

  • Updated PSI-Interface.dll and PRISM.dll

Release 1.4.7

26 Oct 02:10
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File MzidToTsvConverter.zip has MzidToTsvConverter.exe for both .NET 4.6.2 and for .NET 4.7.2 (and above).

  • See the Readme file for usage information
  • See batch file Convert_mzid.bat for example commands

This is a console-only program; run it from the Windows command prompt.

On Linux, use Mono to run the program, for example mono MzidToTsvConverter.exe

Changes

  • Updated CsvHelper.dll and PRISM.dll

Release 1.4.6

02 Mar 18:56
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File MzidToTsvConverter.zip has MzidToTsvConverter.exe for both .NET 4.6.2 and for .NET 4.7.2 (and above).

  • See the Readme file for usage information
  • See batch file Convert_mzid.bat for example commands

This is a console-only program; run it from the Windows command prompt.

On Linux, use Mono to run the program, for example mono MzidToTsvConverter.exe

Changes

  • Optimize caching to improve performance

Release 1.4.5

28 Feb 20:58
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File MzidToTsvConverter.zip has MzidToTsvConverter.exe for both .NET 4.6.2 and for .NET 4.7.2 (and above).

  • See the Readme file for usage information
  • See batch file Convert_mzid.bat for example commands

This is a console-only program; run it from the Windows command prompt.

On Linux, use Mono to run the program, for example mono MzidToTsvConverter.exe

Changes

  • Add argument -proteinList to instruct the program to store a comma-separated list of proteins in the Protein column for any PSM that is associated with multiple proteins

Release 1.4.4

08 Jan 19:22
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File MzidToTsvConverter.zip has MzidToTsvConverter.exe for both .NET 4.6.2 and for .NET 4.7.2 (and above).

  • See the Readme file for usage information

On Linux, use Mono to run the program, for example mono MzidToTsvConverter.exe

Changes

  • Adjust argument name order
  • Flag some arguments as secondary (optional)

Release 1.4.3

08 Jul 01:11
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File MzidToTsvConverter.zip has MzidToTsvConverter.exe for both .NET 4.6.2 and for .NET 4.7.2 (and above).

  • See the Readme file for usage information

On Linux, use Mono to run the program, for example mono MzidToTsvConverter.exe

Changes

  • Show the program build date with the syntax

Release 1.4.2

26 Jun 08:05
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File MzidToTsvConverter.zip has MzidToTsvConverter.exe for both .NET 4.6.2 and for .NET 4.7.2 (and above).

  • See the Readme file for usage information

On Linux, use Mono to run the program, for example mono MzidToTsvConverter.exe

Changes

  • Add an optional column, GeneID, with a command-line switch/argument to supply a regular expression to extract it from the protein description stored under a DBSeq entry in the mzid file

Release 1.4.1

23 Apr 23:32
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File MzidToTsvConverter.zip has MzidToTsvConverter.exe for both .NET 4.6.2 and for .NET 4.7.2 (and above).

  • See the Readme file for usage information

On Linux, use Mono to run the program, for example mono MzidToTsvConverter.exe

Changes

  • Updated packages from NuGet, including PSI_Interface 2.3.0, which has new CV terms
  • Build for .NET 4.62, .NET 4.7.2, and .NET Core 2.0
  • No longer build for .NET 4.5

Release 1.3.3

16 Jul 01:33
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File MzidToTsvConverter.zip has MzidToTsvConverter.exe for both .NET 4.5 and for .NET 4.6.2 (and above).

  • See the Readme file for usage information

On Linux, use Mono to run the program, for example mono MzidToTsvConverter.exe

Changes

  • Now creates the parent directory of the output .tsv file, if missing
  • The -tsv switch now supports both file and directory paths

Version 1.3.2

07 Jun 21:10
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  • Fix a bug with that was especially noticeable with -singleResult, seen with files with the spectrumID format "index=[number]" that did not also have a "scan numbers(s)" CV Param.
  • Other minor updates (code improvements with no effect on the output)