TaskVine executor: add parsl serialize module to default library context #4073
Workflow file for this run
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| name: Parsl | |
| on: | |
| pull_request: | |
| types: | |
| - opened | |
| - synchronize | |
| jobs: | |
| main-test-suite: | |
| strategy: | |
| matrix: | |
| python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | |
| runs-on: ubuntu-20.04 | |
| timeout-minutes: 60 | |
| steps: | |
| - uses: actions/checkout@master | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Collect Job Information | |
| id: job-info | |
| run: | | |
| echo "Python Version: ${{ matrix.python-version }}" >> ci_job_info.txt | |
| echo "CI Triggering Event: ${{ github.event_name }}" >> ci_job_info.txt | |
| echo "Triggering Git Ref: ${{ github.ref }}" >> ci_job_info.txt | |
| echo "Triggering Git SHA: ${{ github.sha }}" >> ci_job_info.txt | |
| echo "Workflow Run: ${{ github.run_number }}" >> ci_job_info.txt | |
| echo "Workflow Attempt: ${{ github.run_attempt }}" >> ci_job_info.txt | |
| as_ascii="$(echo "${{ github.ref_name }}" | perl -pe "s/[^A-z0-9-]+/-/g; s/^-+|-+\$//g; s/--+/-/g;")" | |
| echo "as-ascii=$as_ascii" >> $GITHUB_OUTPUT | |
| - name: Non-requirements based install | |
| run: | | |
| # libpython3.5: make workqueue binary installer happy | |
| # mpich: required by radical executor | |
| sudo apt-get update -q | |
| sudo apt-get install -qy libpython3.5 mpich | |
| - name: setup virtual env | |
| run: | | |
| make virtualenv | |
| source .venv/bin/activate | |
| - name: make deps clean_coverage | |
| run: | | |
| source .venv/bin/activate | |
| make deps | |
| make clean_coverage | |
| - name: make test | |
| run: | | |
| source .venv/bin/activate | |
| # temporary; until test-matrixification | |
| export PARSL_TEST_PRESERVE_NUM_RUNS=7 | |
| make test | |
| ln -s .pytest/parsltest-current test_runinfo | |
| - name: Documentation checks | |
| run: | | |
| source .venv/bin/activate | |
| pip install .[docs] | |
| sudo apt-get install -y pandoc | |
| cd docs | |
| test ! -e stubs | |
| # check we can build the docs without warnings | |
| PYTHONPATH=/tmp/cctools/lib/python3.8/site-packages make SPHINXOPTS=-W html | |
| cd .. | |
| # assert that none of the runs in this test have put an ERROR message into a | |
| # database manager log file or monitoring router log file. It would be better if | |
| # the tests themselves failed immediately when there was a monitoring error, but | |
| # in the absence of that, this is a dirty way to check. | |
| bash -c '! grep ERROR .pytest/parsltest-current/runinfo*/*/database_manager.log' | |
| bash -c '! grep ERROR .pytest/parsltest-current/runinfo*/*/monitoring_router.log' | |
| # temporary; until test-matrixification | |
| rm -f .pytest/parsltest-current test_runinfo | |
| - name: Checking parsl-visualize | |
| run: | | |
| source .venv/bin/activate | |
| sudo apt-get install -y graphviz | |
| pip install .[monitoring,visualization] | |
| parsl/tests/test-viz.sh | |
| - name: make coverage | |
| run: | | |
| source .venv/bin/activate | |
| make coverage | |
| - name: Archive runinfo logs | |
| if: ${{ always() }} | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: runinfo-${{ matrix.python-version }}-${{ steps.job-info.outputs.as-ascii }}-${{ github.sha }} | |
| path: | | |
| runinfo/ | |
| .pytest/ | |
| ci_job_info.txt | |
| compression-level: 9 |