update version, changed default algorithm to heuristic

PedroMTQ · Feb 23, 2022 · a9d300a · a9d300a
1 parent 4fb350c
commit a9d300a
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Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/mantis/MANTIS.py b/mantis/MANTIS.py
@@ -158,7 +158,7 @@ def __init__(self,
         else:                           self.minimum_consensus_overlap = 0.7
 
         if domain_algorithm:            self.domain_algorithm = domain_algorithm
-        else:                           self.domain_algorithm = 'dfs'
+        else:                           self.domain_algorithm = 'heuristic'
 
         if  best_combo_formula:         self.best_combo_formula = best_combo_formula
         else:                           self.best_combo_formula = 1

diff --git a/mantis/__init__.py b/mantis/__init__.py
@@ -1 +1 @@
-__version__ = "1.4.7"
+__version__ = "1.4.8"
diff --git a/mantis/__main__.py b/mantis/__main__.py
@@ -46,7 +46,7 @@ def main():
     parser.add_argument('-mco', '--minimum_consensus_overlap',
                         help='[optional]\tcustom value for the minimum overlap between hits when generating the consensus annotation. Default is 0.7, 0 to accept any consistent hit, regardless of coordinate overlap.')
     parser.add_argument('-da', '--domain_algorithm', choices=['dfs', 'heuristic', 'bpo'],
-                        help='[optional]\tChoose how multiple domains should be processed. Default is dfs.')
+                        help='[optional]\tChoose how multiple domains should be processed. Default is heuristic.')
     parser.add_argument('-tl', '--time_limit',
                         help='[optional]\ttime limit in seconds when running Mantis\' DFS algorithm. Default is 60 seconds')
     parser.add_argument('-od', '--organism_details',