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@PennLINC

Lifespan Informatics and Neuroimaging Center

The Lifespan Informatics and Neuroimaging Center at the University of Pennylvannia
README.md

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  1. qsiprep qsiprep Public

    Preprocessing of diffusion MRI

    Python 169 61

  2. qsirecon qsirecon Public

    Reconstruction of preprocessed q-space images (dMRI)

    Python 18 14

  3. aslprep aslprep Public

    Preprocessing of arterial spin labeling (ASL) data

    Python 53 18

  4. xcp_d xcp_d Public

    Post-processing of fMRIPrep, NiBabies, and HCP outputs

    Python 104 33

  5. CuBIDS CuBIDS Public

    Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.

    Python 28 13

  6. babs babs Public

    BIDS App Bootstrap (BABS)

    Python 10 7

Repositories

Showing 10 of 205 repositories
  • sypres-docs Public
    PennLINC/sypres-docs’s past year of commit activity
    HTML 0 MIT 0 1 6 Updated Dec 9, 2025
  • mebold_abcd_compare_guide Public

    Replication guide for ME-BOLD TRT data processing

    PennLINC/mebold_abcd_compare_guide’s past year of commit activity
    0 0 0 0 Updated Dec 9, 2025
  • tractmaps Public
    PennLINC/tractmaps’s past year of commit activity
    Python 0 0 0 0 Updated Dec 9, 2025
  • mebold-trt Public

    Code for curating and processing the MEBOLD-TRT dataset.

    PennLINC/mebold-trt’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 9, 2025
  • babs Public

    BIDS App Bootstrap (BABS)

    PennLINC/babs’s past year of commit activity
    Python 10 MIT 7 31 2 Updated Dec 8, 2025
  • xcp_d Public

    Post-processing of fMRIPrep, NiBabies, and HCP outputs

    PennLINC/xcp_d’s past year of commit activity
    Python 104 BSD-3-Clause 33 48 13 Updated Dec 8, 2025
  • ModelArray Public

    ModelArray: an R package for statistical analysis of fixel-wise data and beyond

    PennLINC/ModelArray’s past year of commit activity
    R 6 4 19 3 Updated Dec 5, 2025
  • affective-instability Public

    Curation and analysis code for the Affective Instability (PAFIN) dataset.

    PennLINC/affective-instability’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Dec 5, 2025
  • ModelArrayIO Public

    Companion converter software for ModelArray for converting data back and forth from the HDF5 file format.

    PennLINC/ModelArrayIO’s past year of commit activity
    Python 0 BSD-3-Clause 0 5 0 Updated Dec 5, 2025
  • qsiprep Public

    Preprocessing of diffusion MRI

    PennLINC/qsiprep’s past year of commit activity
    Python 169 BSD-3-Clause 61 122 10 Updated Dec 4, 2025
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