fix shagbark and ash spp, add eastern redcedar

PredictiveEcology · Jan 5, 2024 · 591b118 · 591b118
1 parent 49ab3ae
commit 591b118
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -9,7 +9,7 @@ URL:
     https://landr.predictiveecology.org,
     https://github.com/PredictiveEcology/LandR
 Date: 2023-11-23
-Version: 1.1.0.9078
+Version: 1.1.0.9079
 Authors@R: c(
     person("Eliot J B", "McIntire", email = "[email protected]",
            role = c("aut", "cre"), comment = c(ORCID = "0000-0002-6914-8316")),

diff --git a/data-raw/sppEquivalencies_CA.csv b/data-raw/sppEquivalencies_CA.csv
@@ -48,7 +48,7 @@ betupapy,BETU.PAP,Betu_pap,Betu_Pap,Betu papy,Betula papyrifera,Pa birch,Paper b
 ,,Cary_cor,Cary_Cor,Cary cord,Carya cordiformis,,,,,,TRUE,Deciduous,,,,,
 ,,Cary_gla,,Cary glab,Carya glabra,,,,,,TRUE,Deciduous,,,,,
 ,,Cary_lac,,Cary laci,Carya laciniosa,,,,,,TRUE,Deciduous,,,,,
-,,Cary_ora,,Cary orav,Carya ovata,,Shagbark hickory,hickory leading,,,TRUE,Deciduous,hickory,,class2,,
+,,Cary_ova,,Cary ovat,Carya ovata,,Shagbark hickory,hickory leading,,,TRUE,Deciduous,hickory,,class2,,
 ,,Cary_sp,,Cary spp,Carya spp.,,,,,,TRUE,Deciduous,,,,,
 ,,Cary_tom,,Cary tome,Carya tomentosa,,,,,,TRUE,Deciduous,,,,,
 ,,Cast_den,Cast_Den,Cast dent,Castanea dentata,,,,,,TRUE,Deciduous,,,,,
@@ -60,11 +60,11 @@ chamnoot,CHAM.NOO,Cham_noo,Cham_Noo,Cham noot,Chamaecyparis nootkatensis,,,,,,FA
 ,,Corn_nut,,Corn nutt,Cornus nuttallii,,,,,,TRUE,Deciduous,,,,,
 ,,Crat_sp,Crat_Spp,Crat spp,Crataegus spp,,,,,,TRUE,Deciduous,,,,,
 fagugran,FAGU.GRA,Fagu_gra,Fagu_Gra,Fagu gran,Fagus grandifolia,Am beech,American beech,American beech leading,,Fagu_Gra,TRUE,Deciduous,beech,,,,
-fraxamer,FRAX.AME,Frax_ame,Frax_Ame,Frax amer,Fraxinus americana,Am ash,American ash,American ash leading,,Frax_Ame,TRUE,Deciduous,red ash,,,,
+fraxamer,FRAX.AME,Frax_ame,Frax_Ame,Frax amer,Fraxinus americana,Am ash,American ash,American ash leading,,Frax_Ame,TRUE,Deciduous,white ash,,,,
 ,,Frax_lat,,Frax lati,Fraxinus latifolia,,,,,,TRUE,Deciduous,,,,,
 ,,Frax_nig,Frax_Nig,Frax nigr,Fraxinus nigra,Bl ash,Black ash,Black ash leading,,Frax_Nig,TRUE,Deciduous,black ash,,,,
-,,Frax_pen,Frax_Pen_Sub,Frax penn,Fraxinus pennsylvanica,,,,Fraxinus pennsylvanica subintegerrima is a synonym,,TRUE,Deciduous,green ash,,,,
-,,Frax_pen,Frax_Pen,Frax penn,Fraxinus pennsylvanica,,,,,,TRUE,Deciduous,green ash,,,,
+,,Frax_pen,Frax_Pen_Sub,Frax penn,Fraxinus pennsylvanica,,,,Fraxinus pennsylvanica subintegerrima is a synonym,,TRUE,Deciduous,red ash,,,,
+,,Frax_pen,Frax_Pen,Frax penn,Fraxinus pennsylvanica,,,,,,TRUE,Deciduous,red ash,,,,
 ,,Frax_pro,,Frax prof,Fraxinus profunda,,,,,,TRUE,Deciduous,,,,,
 ,,Frax_qua,,Frax quad,Fraxinus quadrangulata,,,,,,TRUE,Deciduous,,,,,
 ,,Frax_sp,Frax_Spp,Frax spp,Fraxinus spp.,Ash,Ash,Ash leading,,Frax_Spp,TRUE,Deciduous,,,,,
@@ -73,7 +73,7 @@ fraxamer,FRAX.AME,Frax_ame,Frax_Ame,Frax amer,Fraxinus americana,Am ash,American
 ,,Hana_vir,,Hana virg,Hamamelis virginiana,,,,,,TRUE,Deciduous,,,,,
 ,,Jugl_cin,Jugl_Cin,Jugl cine,Juglans cinerea,,,,,,TRUE,Deciduous,,,,,
 ,,Jugl_nig,Jugl_Nig,Jugl nigr,Juglans nigra,,,,,,TRUE,Deciduous,,,,,
-,,Thuj_jun,Juni_Vir,Thuj juni,Juniperus virginiana,,,,Not clear why CASFRI name doesn't match,,FALSE,Conifer,,,,,
+,,Thuj_jun,Juni_Vir,Thuj juni,Juniperus virginiana,,,,Not clear why CASFRI name doesn't match,,FALSE,Conifer,eastern redcedar,,,,
 ,,Juni_sco,,Juni scop,Juniperus scopulorum,,,,,,FALSE,Conifer,,,,,
 ,,Lari_dec,,Lari deci,Larix decidua,,,,,,FALSE,Conifer,,,,,
 ,,Lari_kae,Lari_Kae,Lari kaem,Larix kaempferi,,,,,,FALSE,Conifer,,,,,
@@ -157,7 +157,7 @@ querelli,,Quer_ell,,,,,,,,,TRUE,Deciduous,,,,,
 ,,Quer_rob,,Quer robu,Quercus robur,,,,,,TRUE,Deciduous,,,,,
 querrubr,QUER.RUB,Quer_rub,Quer_Rub,Quer rubr,Quercus rubra,,,,,,TRUE,Deciduous,,,,,
 ,,Quer_shu,,Quer shum,Quercus shumardii,,,,,,TRUE,Deciduous,,,,,
-,,Quer_sp,Quer_Spp,Quer spp,Quercus spp.,,,,,,TRUE,Deciduous,,Q,class2,,
+,,Quer_sp,Quer_Spp,Quer spp,Quercus spp.,,,,,,TRUE,Deciduous,red oak,Q,class2,,
 ,,Quer_vel,,Quer velu,Quercus velutina,Bl Oak,Black oak,,,,TRUE,Deciduous,,,class2,,
 ,,Quer_vel,,Quer velu,Quercus velutina (nigra),,,,,,TRUE,Deciduous,,,,,
 ,,Rham_pur,,Rham purs,Rhamnus purshianus,,,,,,TRUE,Deciduous,,,,,

diff --git a/data/sppEquivalencies_CA.rda b/data/sppEquivalencies_CA.rda