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requirements: update fastkde requirement from <2.0.2,>=2.0.0 to >=2.0.0,<2.1.4 #3053

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@dependabot dependabot bot commented on behalf of github Sep 30, 2024

Updates the requirements on fastkde to permit the latest version.

Release notes

Sourced from fastkde's releases.

v2.1.3

  • Bug fix for fastkde.conditional (#48)
  • Fixes wheel building and upload to pypi
  • Support for numpy >1.26.4, including numpy >2.0

The upgrade to numpy 2.0 causes an API compatibility issue (thank you @​AdamOrmondroyd for the initial fix!). Supporting numpy v1 and v2 simultaneously makes it difficult to support older versions of python; support was dropped for python versions less than 3.9 and this is now enforced as a requirement in pyproject.toml.

If python versions less than 3.9 are required, I suggest forcing installation of an older fastkde version, e.g.: pip3 install fastkde<2.1.1; the functionality of fastkde remains the same in v2.0.1 and v2.1.1. Note though that the bug identified in fastkde.conditional will exist in these earlier versions; this bug is not an issue if the xarray functionality is not used.

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This PR causes the following changes to the html docs (ubuntu-latest-3.11):

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@dependabot dependabot bot force-pushed the dependabot/pip/devel/fastkde-gte-1.0.24-and-lt-2.1.4 branch from 02a647c to fc4a4c1 Compare October 2, 2024 22:37
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This PR causes the following changes to the html docs (ubuntu-latest-3.11):

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@dependabot dependabot bot force-pushed the dependabot/pip/devel/fastkde-gte-1.0.24-and-lt-2.1.4 branch from fc4a4c1 to 8d7f78c Compare October 4, 2024 22:47
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This PR causes the following changes to the html docs (ubuntu-latest-3.11):

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@dependabot dependabot bot force-pushed the dependabot/pip/devel/fastkde-gte-1.0.24-and-lt-2.1.4 branch from 8d7f78c to 18b7f63 Compare October 9, 2024 22:29
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This PR causes the following changes to the html docs (ubuntu-latest-3.11):

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@dependabot dependabot bot force-pushed the dependabot/pip/devel/fastkde-gte-1.0.24-and-lt-2.1.4 branch from 18b7f63 to 4816869 Compare October 15, 2024 22:28
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This PR causes the following changes to the html docs (ubuntu-latest-3.11):

diff -r docs-base/ModulatoryProjection.html docs-head/ModulatoryProjection.html
272c272
< <a class="reference internal" href="Port.html"><span class="doc">Port</span></a> are listed in the Port’s <a class="reference internal" href="ParameterPort.html#psyneulink.core.components.ports.parameterport.ParameterPort.mod_afferents" title="psyneulink.core.components.ports.parameterport.ParameterPort.mod_afferents"><code class="xref any py py-attr docutils literal notranslate"><span class="pre">mod_afferents</span></code></a> attribute.</p>
---
> <a class="reference internal" href="Port.html"><span class="doc">Port</span></a> are listed in the Port’s <a class="reference internal" href="Mechanism.html#id7" title="psyneulink.core.components.mechanisms.mechanism.Mechanism_Base.mod_afferents"><code class="xref any py py-attr docutils literal notranslate"><span class="pre">mod_afferents</span></code></a> attribute.</p>
diff -r docs-base/Port.html docs-head/Port.html
616c616
< <code class="xref any docutils literal notranslate"><span class="pre">PathWayProjections</span></code> (listed in its <a class="reference internal" href="#psyneulink.core.components.ports.port.Port_Base.path_afferents" title="psyneulink.core.components.ports.port.Port_Base.path_afferents"><code class="xref any py py-attr docutils literal notranslate"><span class="pre">path_afferents</span></code></a> attribute) as the variable for its
---
> <code class="xref any docutils literal notranslate"><span class="pre">PathWayProjections</span></code> (listed in its <a class="reference internal" href="Mechanism.html#id6" title="psyneulink.core.components.mechanisms.mechanism.Mechanism_Base.path_afferents"><code class="xref any py py-attr docutils literal notranslate"><span class="pre">path_afferents</span></code></a> attribute) as the variable for its
diff -r docs-base/TransferFunctions.html docs-head/TransferFunctions.html
2361c2361
< <p><a class="reference internal" href="OptimizationFunctions.html#psyneulink.core.components.functions.optimizationfunctions.GradientOptimization.bounds" title="psyneulink.core.components.functions.optimizationfunctions.GradientOptimization.bounds"><code class="xref any py py-attr docutils literal notranslate"><span class="pre">bounds</span></code></a> – specifies the lower and upper limits of the result;  if there are none, the attribute is set to
---
> <p><a class="reference internal" href="#psyneulink.core.components.functions.transferfunctions.Exponential.bounds" title="psyneulink.core.components.functions.transferfunctions.Exponential.bounds"><code class="xref any py py-attr docutils literal notranslate"><span class="pre">bounds</span></code></a> – specifies the lower and upper limits of the result;  if there are none, the attribute is set to

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This PR causes the following changes to the html docs (ubuntu-latest-3.11):

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@dependabot dependabot bot force-pushed the dependabot/pip/devel/fastkde-gte-1.0.24-and-lt-2.1.4 branch from fbfb499 to 0acf443 Compare October 24, 2024 22:19
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This PR causes the following changes to the html docs (ubuntu-latest-3.11):

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This PR causes the following changes to the html docs (ubuntu-latest-3.11):

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coveralls commented Oct 29, 2024

Coverage Status

coverage: 83.88% (+0.02%) from 83.858%
when pulling fc8f10e on dependabot/pip/devel/fastkde-gte-1.0.24-and-lt-2.1.4
into 8059f06 on devel.

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jvesely commented Oct 30, 2024

@dependabot rebase

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dependabot bot commented on behalf of github Oct 30, 2024

Looks like this PR has been edited by someone other than Dependabot. That means Dependabot can't rebase it - sorry!

If you're happy for Dependabot to recreate it from scratch, overwriting any edits, you can request @dependabot recreate.

@jvesely jvesely mentioned this pull request Oct 30, 2024
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@jvesely jvesely force-pushed the dependabot/pip/devel/fastkde-gte-1.0.24-and-lt-2.1.4 branch from c0db94f to fc8f10e Compare November 7, 2024 01:17
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This PR causes the following changes to the html docs (ubuntu-latest-3.11):

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jvesely commented Nov 7, 2024

@dependabot recreate

….0.24,<2.1.4

Dependabot couldn't find the original pull request head commit, 0acf443.
@dependabot dependabot bot force-pushed the dependabot/pip/devel/fastkde-gte-1.0.24-and-lt-2.1.4 branch from fc8f10e to b578bb3 Compare November 7, 2024 19:02
@jvesely jvesely changed the title requirements: update fastkde requirement from <1.0.31,>=1.0.24 to >=1.0.24,<2.1.4 requirements: update fastkde requirement from <2.0.2,>=2.0.0 to >=2.0.0,<2.1.4 Nov 7, 2024
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This PR causes the following changes to the html docs (ubuntu-latest-3.11):

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