Version 0.6.2 of ProSolo

New version to ensure archiving on Zenodo.

Version 0.6.1 of ProSolo

Include bugfix for numerical overshoots from libprosic 0.7.3, dealing with numerical overshoots slightly above the previous hard-coded epsilon for such overshoots.

Version 0.6.0 of ProSolo

Includes further runtime optimisations, originally aimed at prosic2, but also benefiting prosolo (compare issue #2). It also incorporates libprosic 0.7.2 bringing back the usage of non-binarised mapq for SNV and None-alt calls, versus the binarization of mapq (0 vs. maximum observed) for indel calling.

Version 0.5.0 of ProSolo

New version of ProSolo, pulling in a lot of changes in libprosic (see the libprosic changelog infos for libprosic 0.7.0 ), especially performance optimisations of more than an order of magnitude (also see issue #2), enabled by perf flamegraphing of the tool. Also, FDR control is now simplified and directly outputs filtered BCF files.

Version 0.4.0 of ProSolo

Version pulling in finer FDR resolution nearer zero and new non-variant site calling from libprosic.

Patch for Event definition

This is release patches a minor error in the Event definitions for err_alt and err_ref.

Version 0.3.0 of ProSolo

This mainly implements full support for the new false discovery rate control for sets of Events.

First fixed release, for bioconda integration.

First release with tests for single nucleotide variant calling functionality on single cell sequencing data paired with a bulk sample of the same cell type.