Releases: ProSolo/prosolo
Version 0.6.2 of ProSolo
New version to ensure archiving on Zenodo.
Version 0.6.1 of ProSolo
Include bugfix for numerical overshoots from libprosic 0.7.3, dealing with numerical overshoots slightly above the previous hard-coded epsilon for such overshoots.
Version 0.6.0 of ProSolo
Includes further runtime optimisations, originally aimed at prosic2
, but also benefiting prosolo
(compare issue #2). It also incorporates libprosic 0.7.2
bringing back the usage of non-binarised mapq
for SNV
and None
-alt calls, versus the binarization of mapq
(0 vs. maximum observed) for indel
calling.
Version 0.5.0 of ProSolo
New version of ProSolo, pulling in a lot of changes in libprosic (see the libprosic changelog infos for libprosic 0.7.0
), especially performance optimisations of more than an order of magnitude (also see issue #2), enabled by perf flamegraphing of the tool. Also, FDR control is now simplified and directly outputs filtered BCF files.
Version 0.4.0 of ProSolo
Version pulling in finer FDR resolution nearer zero and new non-variant site calling from libprosic.
Patch for Event definition
This is release patches a minor error in the Event definitions for err_alt
and err_ref
.
Version 0.3.0 of ProSolo
This mainly implements full support for the new false discovery rate control for sets of Events.
First fixed release, for bioconda integration.
First release with tests for single nucleotide variant calling functionality on single cell sequencing data paired with a bulk sample of the same cell type.