Merge pull request #183 from RGLab/getLogFC-bugfix

Repackaging #182
RGLab · Sep 27, 2023 · 1c60223 · 1c60223
2 parents c834de3 + fcfa4cd
commit 1c60223
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: MAST
 Type: Package
 Title: Model-based Analysis of Single Cell Transcriptomics
-Version: 1.25.2
+Version: 1.27.1
 Date: 2023-04-20
 Authors@R: c(person("Andrew", "McDavid", email = "[email protected]", role = c("aut", "cre")),
             person("Greg", "Finak", email="[email protected]", role='aut'),

diff --git a/R/ZlmFit-logFC.R b/R/ZlmFit-logFC.R
@@ -70,6 +70,7 @@ logFC <- function(zlmfit, contrast0, contrast1){
     } else if(inherits(contrast0, 'Hypothesis')){
         gh <- generateHypothesis(contrast0, coname)
         contrast0 <- gh@contrastMatrix
+        contrast0 <- t(contrast0)
     } 
     if(missing(contrast1)){
         contrast1 <- cbind(0, diag(1, nrow=length(coname)-1))