Server Submit & Setting Scripts

t3/settings/settings_zeus.py

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+"""
+T3's settings
+
+You may keep a short version of this file in a local ".t3" folder under your home folder.
+Any definitions made to the local file will take precedence over this file.
+"""
+
+
+# The execution type can be either 'incore', i.e., executed in the same processor,
+# or 'local', i.e., to be submitted to the server queue if running on a server.
+# If running on a local server, ARC's settings for ``local`` will be used.
+execution_type = {
+    'rmg': 'local',
+    'arc': 'incore',
+}
+
+servers = {
+    'local': {
+        'cluster_soft': 'PBS',
+        'cpus': 16,
+        'max mem': 40,  # GB
+    },
+}
+
+check_status_command = {'OGE': 'export SGE_ROOT=/opt/sge; /opt/sge/bin/lx24-amd64/qstat -u $USER',
+                        'Slurm': '/usr/bin/squeue -u $USER',
+                        'PBS': '/opt/pbs/bin/qstat -u $USER',
+                        'HTCondor': """condor_q -cons 'Member(Jobstatus,{1,2})' -af:j '{"0","P","R","X","C","H",">","S"}[JobStatus]' RequestCpus RequestMemory JobName  '(Time() - EnteredCurrentStatus)'""",
+                        }
+
+submit_command = {'OGE': 'export SGE_ROOT=/opt/sge; /opt/sge/bin/lx24-amd64/qsub',
+                  'Slurm': '/usr/bin/sbatch',
+                  'PBS': '/opt/pbs/bin/qsub',
+                  'HTCondor': 'condor_submit',
+                  }
+
+submit_filenames = {'OGE': 'submit.sh',
+                    'Slurm': 'submit.sl',
+                    'PBS': 'submit.sh',
+                    'HTCondor': 'submit.sub',
+                    }
+
+rmg_initial_memory = 25  # The initial memory for an RMG job when submitted to the queue, in GB