added new workflows #57
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| # This is file is automatically generated. Do not edit. | |
| name: 'mrtrix3' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| on: | |
| push: | |
| branches: ["test_docker_build"] | |
| jobs: | |
| mrtrix3: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| base_image: ['ubuntu:22.04', 'ubuntu:18.04', 'ubuntu:16.04', 'debian:bullseye-slim', 'debian:buster-slim', 'debian:stretch-slim', 'fedora:36', 'centos:7'] | |
| version: ['3.0.2', '3.0.1', '3.0.0'] | |
| method: ['binaries', 'source'] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.10" | |
| - name: Install neurodocker | |
| run: python -m pip install --editable .[dev] | |
| - name: Generate Dockerfile | |
| run: | | |
| apt_based=('ubuntu:22.04', 'ubuntu:18.04', 'ubuntu:16.04', 'debian:bullseye-slim', 'debian:buster-slim', 'debian:stretch-slim') | |
| if [[ " ${apt_based[*]} " =~ ${{ matrix.base_image }} ]]; then | |
| pkg_manager="apt" | |
| fi | |
| yum_based=('fedora:36', 'centos:7') | |
| if [[ " ${yum_based[*]} " =~ ${{ matrix.base_image }} ]]; then | |
| pkg_manager="yum" | |
| fi | |
| neurodocker \ | |
| generate docker \ | |
| --base-image=${{ matrix.base_image }} \ | |
| --pkg-manager=${pkg_manager} \ | |
| --yes \ | |
| --mrtrix3 \ | |
| version=${{ matrix.version }} \ | |
| method=${{ matrix.method }} \ | |
| > Dockerfile_tmp | |
| cat Dockerfile_tmp | |
| - name: Build the Docker image | |
| run: docker build -f Dockerfile_tmp . |