* About this Software

blobify is a clojure application that identifies and analyzes connected components in
graylevel images and image stacks. The program works with image files in both tif and
lsm formats.

(C) 2011 Robert R. Snapp

* Usage

To run blobify, you will need:

1) JDK 1.6+ from Sun/Oracle.
2) blobify-standalone.jar (contains clojure, clojure-contrib, and other jars)

Place blobify-standalone.jar in your classpath and execute

java -cp blobify-standalone.jar <image-file-roster>

where <image-file-roster> is a text file that lists each file to be processed on a
separate line, followed by the region of interest as a sequence of 6 integers,
according to the format:

<file-name> <row> <col> <layer> <width> <height> <thickness>

Each field should be separated by whitespace consisting of spaces,
tabs, or by commas.

* License

blobify is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.

blobify is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
General Public License for more details.

You should have received a copy of the GNU General Public License
along with blobify.  If not, see <http://www.gnu.org/licenses/>.