undo all debug stuff

.github/workflows/tutorial-tests.yml

@@ -3,8 +3,12 @@ name: Test Tutorial
 on:
   push:
     branches:
-      # - main
-      - sroet-patch-1
+      - main
+    tags:
+      - "[0-9]+.[0-9]+.[0-9]+"
+  schedule:
+    # Weekly on saturday 23:59
+    - cron: "59 23 * * 6"
 
 
 jobs:
@@ -45,9 +49,6 @@ jobs:
         run: echo "TQDM_MININTERVAL=10" >> "$GITHUB_ENV"
       - name: Run Tutorial test
         run: |
-          # DEBUG; TODO REMOVE
-          ls -l dataset/*
-          
           # Hardcode the conversion line
           for x in dataset/*.mrc; do python -c "import mrcfile; mrc = mrcfile.mmap('$x', 'r+'); mrc.voxel_size = 13.79"; done
           python -u tests/test_tutorial.py

docs/tutorials/tests/test_tutorial.py

@@ -2,11 +2,13 @@
 import subprocess
 from mdextractor import extract_md_blocks
 
+
 def sanitize_block(block):
     block = block.split()
-    out = [i for i in block if i and i != '\\']
+    out = [i for i in block if i and i != "\\"]
     return out
 
+
 print("Doing tutorial tests")
 lines = "".join(open("Tutorial.md").readlines())
 blocks = extract_md_blocks(lines)
@@ -16,17 +18,15 @@ def sanitize_block(block):
     raise ValueError("Did not find any code blocks")
 for block in blocks:
     # strip out extra typing
-    block = block.strip('bash')
-    # DEBUG: TODO: REMOVE
-    print(f"{block.split()=}")
+    block = block.strip("bash")
     if block.split()[0].endswith(".py"):
         print(f"Running: {block}")
 
         block = sanitize_block(block)
         outfile = None
-        # Deal with stdout redirect 
+        # Deal with stdout redirect
         if block[-2] == ">":
-            outfile = open(block[-1], 'a+')
+            outfile = open(block[-1], "a+")
             block = block[:-2]
         # Check=True makes sure this code returns early
         subprocess.run(block, check=True, stdout=outfile)