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get tests to 100% coverage #131

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merged 14 commits into from
Feb 29, 2024
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@sroet sroet commented Feb 28, 2024

this tries to make sure at least all the lines in our test files are hit

closes #129

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github-actions bot commented Feb 28, 2024

File Coverage Missing
All files 80%
src/pytom_tm/angles.py 94% 44
src/pytom_tm/correlation.py 85% 94-95 126
src/pytom_tm/entry_points.py 68% 27 104-121 283-342 431-445 542-557 791-858 899-910
src/pytom_tm/extract.py 73% 107-118 170-176 202-205 277-295
src/pytom_tm/io.py 42% 14-18 24-27 33-36 42-45 51-54 61-65 73-86 92-99 106-113 128-130 163 197-198 243-245 261 277 294-303 323-328
src/pytom_tm/mask.py 80% 70 85 94-95
src/pytom_tm/matching.py 95% 186-196 340
src/pytom_tm/parallel.py 84% 14-15 81-87 95-97 104 109 148
src/pytom_tm/plotting.py 16% 20-22 25-32 36-44 48-51 54-70 73-74 77-78 98-103 119-127 133-150 165-173 177-194 198-206 210-217 223 229 234 248-398
src/pytom_tm/template.py 57% 57-58 67 76-87 92-97 107-112 114
src/pytom_tm/tmjob.py 96% 170-171 183 189-191 194 327 367
src/pytom_tm/utils.py 78% 16-18
src/pytom_tm/weights.py 95% 59 290-291 298 477 480 483

Minimum allowed coverage is 78%

Generated by 🐒 cobertura-action against d9926eb

@sroet sroet marked this pull request as ready for review February 29, 2024 14:23
@sroet sroet requested a review from McHaillet February 29, 2024 14:24
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sroet commented Feb 29, 2024

@McHaillet all the tests files are out of the coverage list 😄 please have a look

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LGTM!

@sroet sroet merged commit e234eec into SBC-Utrecht:main Feb 29, 2024
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@sroet sroet deleted the get_tests_to_100_coverage branch February 29, 2024 15:20
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fix test_tmjob and test_weights
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