Major changes
- We have a site! (It's automatically deployed with changes to the main branch)
- The tomogram mask supplied to match_template can now be ignored upon extraction to prevent unnecessary recalculation.
- After some initial issues, reading of starfiles by RELION5 should be fixed when using relion5-compat mode in extract_candidates.
- Score maps can be written out in float16 mode to save some disk space.
- Defocus handedness can be specified in match_template and will calculate defocus offsets for each subvolume. The site got a new 'Benchmarks' tab where a post is added that illustrates the effects of specifying defocus handedness (check it out here).
PR overview
- fix defocus help unit by @sroet in #197
- mkdocs site for pytom-match-pick by @McHaillet in #199
- fix: strings signs in deploy docs workflow by @McHaillet in #203
- Update README.md by @sroet in #202
- update workflow permission to write github pages by @McHaillet in #204
- Update Developers.md by @McHaillet in #205
- Add ignore tomo mask option by @sroet in #209
- add check on tomo mask shape by @sroet in #210
- site updates: fix some usage informations, make authorship clear, add logo by @McHaillet in #212
- add E501 check by @sroet in #216
- Create CITATION.cff by @sroet in #218
- Fix relion5 compat by @McHaillet in #220
- logging.warn will be deprecated by @McHaillet in #223
- add comment to entry_points that tells developers not to use line bre… by @McHaillet in #219
- feature: calculate subvolume defocus values by @McHaillet in #217
- Enable 16 bit output by @sroet in #222
Full Changelog: 0.7.1...0.7.2
Contributors
sroet and McHaillet