Fully automated analysis pipeline for electrophysiology data.
Requirements
- MATLAB 2020a+
- Windows, Linux, or macOS
Description This pipeline is designed for electrophysiology data acquired using Symphony Data Acquisition software . It is used to analyze raw timeseries (as they come off of an amplifier) to extract meaningful neurophysiological signatures and visualize data. Compatible data types include voltage clamp, current clamp, and cell-attached/extracellular data. To use, download the repository onto your local device, and follow the instructions in the appInfo/instructions.html file. For questions, contact [email protected], or the Dunn Lab at UCSF.
Use
To use, download this repository onto your computer and place it on your matlab path. Enter physiologyPipeline into the MATLAB command window. A small GUI should open. You can find complete usage instructions by selecting Info-->Instructions from the menubar. You can also find instructions in the repository by opening /appInfo/instructions.html.