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Samples from working with different fMRI preprocessing interfaces and analysis packages

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.gitignore
.gitignore
 
 
FSL_BatchProcessing.sh
FSL_BatchProcessing.sh
 
 
LICENSE
LICENSE
 
 
MCA_BIDS_Events_04162024.ipynb
MCA_BIDS_Events_04162024.ipynb
 
 
MCA_FirstLevelDataPrep_FSL_a.sh
MCA_FirstLevelDataPrep_FSL_a.sh
 
 
MCA_FirstLevelStats-CompCor-DataPrep.ipynb
MCA_FirstLevelStats-CompCor-DataPrep.ipynb
 
 
MCA_MEM_Pipeline-DataPrepStats.ipynb
MCA_MEM_Pipeline-DataPrepStats.ipynb
 
 
MCA_MEM_firstlevelSTATSONLY_FEAT_checks.sh
MCA_MEM_firstlevelSTATSONLY_FEAT_checks.sh
 
 
MCA_MEM_firstlevel_FEAT_checks_a.sh
MCA_MEM_firstlevel_FEAT_checks_a.sh
 
 
MCA_MEM_secondlevel_FEAT_checks.sh
MCA_MEM_secondlevel_FEAT_checks.sh
 
 
MCA_MRIcroGL_group_figures.py
MCA_MRIcroGL_group_figures.py
 
 
MCA_Mem_DataViz-Scrubbing.ipynb
MCA_Mem_DataViz-Scrubbing.ipynb
 
 
MCA_Mem_Motion_Outliers.sh
MCA_Mem_Motion_Outliers.sh
 
 
MCA_Mem_Performance.sh
MCA_Mem_Performance.sh
 
 
MCA_Mem_StatsOnly_design_template_mpCON_oacV.fsf
MCA_Mem_StatsOnly_design_template_mpCON_oacV.fsf
 
 
MCA_Mem_firstleveldesign_template_NOmpCON_oacV.fsf
MCA_Mem_firstleveldesign_template_NOmpCON_oacV.fsf
 
 
MCA_Mem_firstleveldesign_template_mpCON_oacV.fsf
MCA_Mem_firstleveldesign_template_mpCON_oacV.fsf
 
 
MCA_Overview.ipynb
MCA_Overview.ipynb
 
 
MCA_PAIN_feat_trial.sh
MCA_PAIN_feat_trial.sh
 
 
MCA_PAIN_firstlevelSTATSONLY_FEAT_checks.sh
MCA_PAIN_firstlevelSTATSONLY_FEAT_checks.sh
 
 
MCA_PAIN_vols.sh
MCA_PAIN_vols.sh
 
 
MCA_Pain_ FirstLevelStats-CompCor-DataPrep.ipynb
MCA_Pain_ FirstLevelStats-CompCor-DataPrep.ipynb
 
 
MCA_Pain_DataViz-Scrubbing.ipynb
MCA_Pain_DataViz-Scrubbing.ipynb
 
 
MCA_Pain_Motion_Outliers.sh
MCA_Pain_Motion_Outliers.sh
 
 
MCA_Pain_StatsOnly_design_template_mpCON_oacV.fsf
MCA_Pain_StatsOnly_design_template_mpCON_oacV.fsf
 
 
MCA_Pain_firstleveldesign_template_NOmpCON_oacV.fsf
MCA_Pain_firstleveldesign_template_NOmpCON_oacV.fsf
 
 
MCA_Pain_firstleveldesign_template_mpCON_oacV.fsf
MCA_Pain_firstleveldesign_template_mpCON_oacV.fsf
 
 
MCA_Subj_Level_MemPrePro+Stats_FSL_oacI.sh
MCA_Subj_Level_MemPrePro+Stats_FSL_oacI.sh
 
 
MCA_Subj_Level_MemPrePro+Stats_FSL_oacV.sh
MCA_Subj_Level_MemPrePro+Stats_FSL_oacV.sh
 
 
MCA_Subj_Level_PainPrePro+Stats_FSL_oacI.sh
MCA_Subj_Level_PainPrePro+Stats_FSL_oacI.sh
 
 
MCA_Subj_Level_PainPrePro+Stats_FSL_oacV.sh
MCA_Subj_Level_PainPrePro+Stats_FSL_oacV.sh
 
 
MRIcroGL_group_figures.py
MRIcroGL_group_figures.py
 
 
NLA_DCM2BIDS.sh
NLA_DCM2BIDS.sh
 
 
Nilearn_SubjectLevelGLM.ipynb
Nilearn_SubjectLevelGLM.ipynb
 
 
README.md
README.md
 
 
SENS_FNIRT_Registration.sh
SENS_FNIRT_Registration.sh
 
 
fMRI_BIDS_Conversion.sh
fMRI_BIDS_Conversion.sh
 
 

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fMRI_CodeScripts

Samples from working with different fMRI preprocessing interfaces and analysis packages

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Samples from working with different fMRI preprocessing interfaces and analysis packages

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