Fix: change the bounds of MAR04644

[JHL-452b]

Main improvements in this PR:

As proposed in #969

• Change the MAR04644 to be irreversible.

I hereby confirm that I have:

• Tested my code on my own computer for running the model
• Selected develop as a target branch
• Any removed reactions and metabolites have been moved to the corresponding deprecated identifier lists

[github-actions]

This PR has been automatically tested with GH Actions. Here is the output of the MACAW test:

Starting dead-end test...
 - Found 1523 dead-end metabolites.
 - Found 1328 reactions incapable of sustaining steady-state fluxes in either direction due to these dead-ends.
 - Found 1975 reversible reactions that can only carry steady-state fluxes in a single direction due to dead-ends.
Starting duplicate test...
 - Skipping redox duplicates because no redox_pairs and/or proton_ids were provided.
 - Found 447 reactions that were some type of duplicate:
   - 0 were completely identical to at least one other reaction.
   - 13 involve the same metabolites but go in the opposite direction or have the opposite reversibility as at least one other reaction.
   - 447 involve the same metabolites but with different coefficients as at least one other reaction.

This and a more detailed output from MACAW are also committed to data/macawResults/.

Note: In the case of multiple test runs, this post will be edited.

[hhl-24]

LGTM!

[github-actions]

This PR has been automatically tested with GH Actions. Here is the output of the gene essentiality test:

     cellLine     TP     TN     FP    FN     accuracy    sensitivity    specificity       F1         MCC   
    __________    __    ____    __    ___    ________    ___________    ___________    ________    ________

    {'DLD1'  }    39    2155    63    279    0.86514       0.12264         0.9716       0.18571     0.15884
    {'GBM'   }    35    2134    67    299    0.85562       0.10479        0.96956       0.16055     0.12797
    {'HCT116'}    49    2179    57    306     0.8599       0.13803        0.97451       0.21258     0.19536
    {'HELA'  }    32    2237    74    250    0.87505       0.11348        0.96798       0.16495     0.12807
    {'RPE1'  }    15    2175    87    258    0.86391      0.054945        0.96154          0.08    0.026002
    {'all'   }     7    2375    99    112    0.91863      0.058824        0.95998      0.062222    0.019875

Note: In the case of multiple test runs, this post will be edited.