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0.8.0

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@jdcla jdcla released this 09 May 19:09
· 16 commits to main since this release
158a1bb

Moving repositories, RiboTIE is now part of TRISTAN,

This release contains breaking changes

Features

  • --pretrain Support for pre-training a new models using ribosome profiling data. It is now possible to apply RiboTIE on new species
  • --parallel : Support for parallel processing of ribo-seq samples for easy deployment on HPC servers.
  • Ability to process multiple separate config files. As such, it is possible to group settings together. e.g. ribotie base.yml samples.yml pretrained_model.yml
  • --version flag

Changes

  • refactor : --ribo to --samples
  • updated config file handling
    • multiple configs
    • all arguments
    • overriden by bash variables
  • --version flag