Code

Langgraph Agent - ML4Bio#280

Code

Draft

KastanDay wants to merge 146 commits intomainUIUC-Chatbot/ai-ta-backend:mainfrom langgraphUIUC-Chatbot/ai-ta-backend:langgraphCopy head branch name to clipboard

+5,922-1,733

Commits

Commits on Aug 11, 2023

• adding minimal on_new_PR webhook for Github lil-jr-dev

  KastanDay

  committed
  90a2e5e

• debug env vars

  Show description for 2e8d3ff
  KastanDay

  committed
  2e8d3ff

• fixed env vars

  KastanDay

  committed
  78bfe38

• refactor github initialization

  KastanDay

  committed
  c048e09

• fix repo name

  KastanDay

  committed
  78d7e7c

• fixing repo parsing from json

  KastanDay

  committed
  bebd6dc

• fixing repo parsing from json

  KastanDay

  committed
  2864486

• add functions for issues and PRs. Rework auth for GH Auth

  KastanDay

  committed
  7048df2

• fix the issue vs issues spelling

  KastanDay

  committed
  b44ce17

• working on fixing issues

  KastanDay

  committed
  de4e67d

• fixing up the issue and comment handlers

  KastanDay

  committed
  1c306c1

• fixing issue comments

  KastanDay

  committed
  cc19161

• fixing paylods

  KastanDay

  committed
  fd4bec6

• don't reply to own comments

  KastanDay

  committed
  78a2ed0

• no inf loops, and responding to new issues should finally work

  KastanDay

  committed
  46472de

• handle conditional JSON blobs better with .get()

  KastanDay

  committed
  18095bb

• typo

  KastanDay

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  b20b60c

• working responses to new Issues, new PRs and new comments on each

  KastanDay

  committed
  ad21acb

• MAJOR push: adding agents that respond to new PRs and new Issues. No comments response yet

  KastanDay

  committed
  5e30753

Commits on Aug 12, 2023

• major push: first draft of working MVP. Create an issue -> get a PR

  KastanDay

  committed
  7700e20

• minor type fix

  KastanDay

  committed
  5bc16f4

• set langchain to my own fork

  KastanDay

  committed
  b8c4f7a

• set langchain to my own fork, with proper branch

  KastanDay

  committed
  b1c55a0

• adding bot for on-pr-comment hook

  KastanDay

  committed
  5ac47a2

• add bot for issue comments, have an MVP for the WHOLE STACK now. woohoo!

  KastanDay

  committed
  390674a

• typo fix

  KastanDay

  committed
  1543863

• add error messages as github comments

  KastanDay

  committed
  30b10de

• fix branch name in new issue comment

  KastanDay

  committed
  a6cf7e1

• adding automatic retries to the GH agents on-comment runs

  KastanDay

  committed
  fa971e2

• minor type fix

  KastanDay

  committed
  b06520d

• refine bot retry mechanism

  KastanDay

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  691e170

• wonderful refactor of bot responsibilities. GH_Agent is now a more refined class, with auto retries

  KastanDay

  committed
  f4dbd09

• spelling typo

  KastanDay

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  d4c69d8

• spelling typo

  KastanDay

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  b982acf

• add traceback exception

  KastanDay

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  5022221

• add traceback exception

  KastanDay

  committed
  c737b4c

Commits on Aug 14, 2023

• improve traceback exception, improve branch handling

  KastanDay

  committed
  8fb51fb

Commits on Sep 20, 2023

• adding run file so imports work

  KastanDay

  committed
  9bbb688

• use relative imports, remove the need to update python path

  KastanDay

  committed
  772afbc

Commits on Sep 29, 2023

• fix relative imports and failing VectorStoreRetriever import from langchain

  KastanDay

  committed
  4bf7948

Commits on Oct 1, 2023

• major code cleanup, add langsmith tracing

  KastanDay

  committed
  dbc10c5

Commits on Oct 11, 2023

• Completed Setup UIUC.chat vectorstore retrievers for all the common tools

  KastanDay

  committed
  66fed91

Commits on Oct 17, 2023

• add several bio packages as vectorstore retriever tools

  KastanDay

  committed
  bc37e20

Commits on Oct 18, 2023

• Plan and execute agent

  rohan-uiuc

  committed
  c4f146c

• Merge branch 'github_agent_webhooks' of github.com:UIUC-Chatbot/ai-ta-backend into github_agent_webhooks

  rohan-uiuc

  committed
  fd3f5b0

Commits on Nov 1, 2023

• Add support for Azure models, add LangSmith link to github comment, various prompt improvements. Merge w/ rohan

  KastanDay

  committed
  3ea9ec3

• Major code cleanup, deleting old code. Added README.

  KastanDay

  committed
  239d5ec

Commits on Nov 2, 2023

• Further code cleanup, and full implementation of LangSmith real-time trace on Github

  KastanDay

  committed
  b5f65ac

• Fixed the 'follow bot's progress in real time' link

  KastanDay

  committed
  9654c05

• utils code cleanup

  KastanDay

  committed
  6f69756

• Experimental: Adding newrelic logging, major railway.json change

  KastanDay

  committed
  e19159a

• setup newrelic-admin before installing telemetry

  KastanDay

  committed
  59e58a9

• Maybe it's just pip3?

  KastanDay

  committed
  5fec929

• attempting to change the order of the build steps

  KastanDay

  committed
  cd9a019

• moving newrelic phase into the phase

  KastanDay

  committed
  f937eec

• fix silly mistake of trying to run the program too early

  KastanDay

  committed
  34f1f8b

• python310 (instead of 3.8)

  KastanDay

  committed
  d27011b

• consolidate newrelic install command to original one-liner

  KastanDay

  committed
  d36951f

• INFRA ONLY, NO LOGS. attempt to add the license key better

  KastanDay

  committed
  49887f2

• INFRA ONLY, NO LOGS

  KastanDay

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  c489d8c

• INFRA ONLY, NO LOGS

  KastanDay

  committed
  12f02d3

• Install worked... but infra staid 'unsupported'. trying to add back logs-integration

  KastanDay

  committed
  bb95ca5

• try to fix newrelic.ini path

  KastanDay

  committed
  bc9dd6b

• try to fix newrelic.ini path v2

  KastanDay

  committed
  331a21b

• try to fix newrelic.ini path v3

  KastanDay

  committed
  2dd4431

• try to fix newrelic.ini path v4

  KastanDay

  committed
  e251c4b

• try to fix newrelic.ini path v5 -- very close, just removeing a double init in the Python Agent newrelic

  KastanDay

  committed
  ad0ba77

• Added custom code execution tool from autogen, integrated with plan&execute agent.

  Show description for bc33a90
  rohan-uiuc

  committed
  bc33a90

• Merge branch 'github_agent_webhooks' of github.com:UIUC-Chatbot/ai-ta-backend into github_agent_webhooks

  rohan-uiuc

  committed
  4166236

• change LangChain branch to our new internal Langchain fork

  KastanDay

  committed
  616905f

• add ray start --head to try to fix 'unable to start GCS' for ray

  KastanDay

  committed
  133e9e2

• 📜 update readme

  KastanDay

  committed
  e472d97

• support custom langchain-experimental

  KastanDay

  committed
  1417c5e

• fix langchain-experimental, and random log messages

  KastanDay

  committed
  f58d232

• 2 spaces is the only way

  KastanDay

  committed
  a67781b

Commits on Nov 3, 2023

• Adding ability to fetch linked PRs from issues and vice-versa!

  KastanDay

  committed
  dcc1c91

Commits on Nov 6, 2023

• First attempt at Dockerfile for code execution

  KastanDay

  committed
  abbaa08

• Add cmd-line args to support Docker, add shell and filesystem tool

  KastanDay

  committed
  9b5db8b

Commits on Nov 7, 2023

• Setting up docker image for each request (Issue/PR) (#133)

  Show description for 2094625
  

  rohan-uiuc

  and

  KastanDay

  authored
  2094625

Commits on Nov 8, 2023

• WIP docker setup

  rohan-uiuc

  committed
  b69626a

Commits on Nov 9, 2023

• Working docker setup

  rohan-uiuc

  committed
  5293f9b

Commits on Nov 14, 2023

• Fix openai version

  KastanDay

  committed
  cdcec7c

• adding langchainhub

  KastanDay

  committed
  be0d25f

• add MemGPT custom implementation plan

  KastanDay

  committed
  87f83f5

• Initial attempts at MemoryCallbacks

  KastanDay

  committed
  4d0f5e3

• working M1 docker builds

  KastanDay

  committed
  7254d77

• proper .env path in Dockerfile

  KastanDay

  committed
  900a845

Commits on Nov 15, 2023

• can't get .env from above Dockerfile... need to do in bash/python

  KastanDay

  committed
  0900156

• working docker builds

  KastanDay

  committed
  cbd9a7f

Commits on Nov 16, 2023

• Changes for handling new comment opened

  rohan-uiuc

  committed
  c2cec4c

Commits on Nov 22, 2023

• Improve Docker launching; much better image re-build on all code changes

  KastanDay

  committed
  51e3d73

Commits on Nov 27, 2023

• Revert to before reformat Docker utils @ 51e3d73

  KastanDay

  committed
  0964cc7

Commits on Dec 19, 2023

• Replace Docker with E2B Sandbox for code and shell execution (#177)

  Show description for bc5054e
  KastanDay

  authored
  bc5054e

Commits on Jan 22, 2024

• langgraph experiment

  minump

  committed
  57eff15

• gitignore node modules

  minump

  committed
  c015c36

Commits on Jan 26, 2024

• added to gitignore

  minump

  committed
  2be2b19

• removed custom file

  minump

  committed
  0f2d9a8

• add langgraph requirements

  minump

  committed
  41a25d4

• use langgraph agent instead of ml4bio agent

  minump

  committed
  0dd9c98

• workflowAgnet with langgraph

  minump

  committed
  da0106e

• removed unwanted import

  minump

  committed
  40b4044

Commits on Jan 29, 2024

• Add Trunk formatting, same as main branch. All files updated.

  KastanDay

  committed
  e10cb09

• Add requirements, beginning of prompt_function

  KastanDay

  committed
  432f5b1

Commits on Feb 1, 2024

• agentState not keeping track of intermediate steps

  minump

  committed
  88aefdd

Commits on Feb 6, 2024

• Updating requirements to make them compatible with langchain-openai==0.0.5

  rohan-uiuc

  committed
  b8868a7

Commits on Feb 8, 2024

• Major version updates: update reqs, update imports, fix e2b sandbox

  KastanDay

  committed
  f549858

• Clean up linting bugs

  KastanDay

  committed
  3da4f20

Commits on Feb 12, 2024

• changes to langggraph agent

  minump

  committed
  104ba0d

• azureChat and OpenAIChat llm

  minump

  committed
  59bce34

Commits on Feb 14, 2024

• Switch default model to Azure GPT-4-turbo-0125 better for coding

  KastanDay

  committed
  099c991

• fmt only

  KastanDay

  committed
  effb850

Commits on Feb 15, 2024

• update requirements to install our fork of langchain-openai, not the default

  KastanDay

  committed
  27d3a9d

• My test script for testing langgraph

  KastanDay

  committed
  daab116

• demo notebook for replanning step

  KastanDay

  committed
  56aa9f3

• Fix intermediate_steps double usage... add example of adding custom info to state via return {}

  KastanDay

  committed
  1b1d339

Commits on Feb 21, 2024

• Integrating demo plan and execute notebook with existing agent

  rohan-uiuc

  committed
  04a5a43

• Changing function names since langchain has a regex validation for it.

  rohan-uiuc

  committed
  49b53f4

Commits on Feb 22, 2024

• Updated test file for agent v2

  rohan-uiuc

  committed
  d07d2ef

• Updated the import to use the new agent and fixed typo in filename

  rohan-uiuc

  committed
  88a898d

• Move github tool to Langchain_community repo, fix imports

  KastanDay

  committed
  cc7e845

• minor prompt and variable changes

  KastanDay

  committed
  caaa7b7

• Move to async endpoint, set max iterations to 100 (up from 25)

  KastanDay

  committed
  4dd3547

Commits on Mar 1, 2024

• gitignore

  minump

  committed
  154a4b7

• lats test

  minump

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  811d73a

Commits on Mar 11, 2024

• lats testing with separate planner and executor

  minump

  committed
  7bfa51d

Commits on Mar 15, 2024

• testing

  minump

  committed
  586a86d

Commits on Mar 21, 2024

• added r code run

  minump

  committed
  2311c70

Commits on Mar 22, 2024

• rcode e2b changes

  minump

  committed
  ee2b12c

Commits on Jun 7, 2024

• using langgraph agent v2

  minump

  committed
  9bac224

• updated requirements

  minump

  committed
  7e75879

Commits on Jun 14, 2024

• Fix conflicting openai requirements

  KastanDay

  committed
  9c02c56

• Trunk upgrade

  KastanDay

  committed
  3474e05

• Fix versions, add uv to pip install on Railway

  KastanDay

  committed
  aab6681

• Fix uv python version

  KastanDay

  committed
  f57d7e5

• Set VIRTUAL_ENV for uv

  KastanDay

  committed
  fce501b

• try uv --system for using pip without virtualenv

  KastanDay

  committed
  32ed3a2

• Upgrade uv for --system command added

  KastanDay

  committed
  25de90a

• Upgrade uv for --system command added, use manual install instead of pip

  KastanDay

  committed
  6960dfd

• Give up on UV, sigh

  KastanDay

  committed
  350912b

• Comment out e2b codeintrepreter, deprecated

  KastanDay

  committed
  cc2c612

• Add Flask[async] dep

  KastanDay

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  504b48d

• Print payload so we can test locally

  KastanDay

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  0a785df

• Add example payload for local testing

  KastanDay

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  4847a64

• Fully format all code using trunk

  KastanDay

  committed
  6e24d64

• Print payload so we can test locally

  KastanDay

  committed
  ddb3128

• Save payload to file

  KastanDay

  committed
  41fce2c