make change log match json

change_log.R

@@ -0,0 +1,11 @@
+library(googlesheets4)
+library(dplyr)
+library(readr)
+
+url <- "https://docs.google.com/spreadsheets/d/1mZlJ9IauaVNiJ6f2Q14pg6rGEpWVrAjMJmAZ_FioVTY"
+
+log <- read_sheet(url, sheet="Change Log") %>%
+    filter(!is.na(Version)) %>%
+    mutate(`Change notes` = gsub('"', "'", `Change notes`))
+
+write_tsv(log, file="change_log.tsv")

change_log.tsv

@@ -9,7 +9,6 @@ Version	Table	Field	Change notes
 1.1	experiment_rna_short_read	all	table added
 1.1	all	enumerated fields	required fields cannot have missing values; optional fields can have missing or blank values and do not have 'Unknown' as a separate option
 1.1	participant	affected_status	made required
-1.2	genetic_findings	all	table added
 1.2	experiment_nanopore	all	table added
 1.2	aligned_nanopore	all	table added
 1.2	aligned_nanopore_set	all	table added
@@ -19,6 +18,7 @@ Version	Table	Field	Change notes
 1.2	aligned_rna_short_read	all	DCC added 'Is Unique' column to data model document to support validation - no impact to data submitters.
 1.2	aligned_nanopore	all	DCC added 'Is Unique' column to data model document to support validation - no impact to data submitters.
 1.2	called_variants_nanopore	all	DCC added 'Is Unique' column to data model document to support validation - no impact to data submitters.
+1.3	genetic_findings	all	table added
 1.3	experiment_pac_bio	all	table added
 1.3	aligned_pac_bio	all	table added
 1.3	aligned_pac_bio_set	all	table added
@@ -29,9 +29,6 @@ Version	Table	Field	Change notes
 1.3	allele_specific_atac_short_read	all	table added
 1.3	experiment	table_name	DCC added 'experiment_nanopore, experiment_pac_bio, and experiment_atac_short_read' as valid experiment types - no impact to data submitters.
 1.3	aligned	all	table added - will be populated by DCC in post-processing - no impact on data submitters.
-1.3	genetic_findings	all	renamed table on sheet from genetics_findings to genetic_findings
 1.3	participant	solve_status	required field added
 1.3	participant	missing_variant_case	required field added
 1.3	participant	missing_variant_details	optional field added
-1.3	genetic_findings	variant_reference_assembly	added CHM13 as allowable value for enumeration
-1.3	genetic_findings	GREGoR_variant_classification	added 'Well-established P/LP' as allowable value for enumeration