Skip to content

Derecho Benchmarks with ASV #5

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
wants to merge 1 commit into
base: main
Choose a base branch
from
Open

Derecho Benchmarks with ASV #5

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
1 change: 1 addition & 0 deletions results/derecho-cpu/39157bad-conda-py3.11-netcdf4-pip+pyfma-setuptools_scm-xarray.json
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1 @@
{"commit_hash": "39157bada4e68a20fec878b2df35f8bde1ce8860", "env_name": "conda-py3.11-netcdf4-pip+pyfma-setuptools_scm-xarray", "date": 1724977765000, "params": {"cpu": "AMD EPYC 7763 Milan", "machine": "derecho-cpu", "num_cpu": "128", "os": "linux", "ram": "256GB", "python": "3.11", "setuptools_scm": "", "xarray": "", "netcdf4": "", "pip+pyfma": ""}, "python": "3.11", "requirements": {"setuptools_scm": "", "xarray": "", "netcdf4": "", "pip+pyfma": ""}, "env_vars": {}, "result_columns": ["result", "params", "version", "started_at", "duration", "stats_ci_99_a", "stats_ci_99_b", "stats_q_25", "stats_q_75", "stats_number", "stats_repeat", "samples", "profile"], "results": {"face_bounds.FaceBounds.time_face_bounds": [[0.00833752122707665, 1.7360403374768794, 0.18782083806581795, 1.4718663555104285], [["PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/ugrid/quad-hexagon/grid.nc')", "PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/ugrid/geoflow-small/grid.nc')", "PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/scrip/outCSne8/outCSne8.nc')", "PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/mpas/QU/oQU480.231010.nc')"]], "59ab137a0d4a031edd79f08b2454bef8eeb9cd8ef799f72e5272f249063ec61d", 1728970893278, 90.891, [0.0081086, -0.17625, 0.18175, -1.1866], [0.0087865, 3.6483, 0.19386, 4.1303], [0.0081682, 1.7169, 0.18437, 1.4453], [0.0083916, 1.7552, 0.19122, 1.4985], [1, 1, 1, 1], [10, 2, 6, 2]], "import.Imports.timeraw_import_uxarray": [[2.0502815451472998], [], "05d7358a621ba8469294e43469945f02cd99857a9d23b35cc2a37d5c90deaf20", 1728970938095, 24.172, [2.035], [2.0769], [2.0461], [2.0629], [1], [7]], "mpas_ocean.CheckNorm.time_check_norm": [null, [["'480km'", "'120km'"]], "80690bc549b4d4d30b9190960e39e99a70d987dd80b2fe9655f568b292f50f7c", 1728970737079, 0.20663], "mpas_ocean.ConnectivityConstruction.time_face_face_connectivity": [[0.042875401210039854, 0.6469989449251443], [["'480km'", "'120km'"]], "d17d64682605c89f3a4a41dacad12310025c7e894bde080abaa54192989d3bfe", 1728970950484, 9.5148, [0.041875, 0.6332], [0.044305, 0.65537], [0.042698, 0.64159], [0.043187, 0.64937], [1, 1], [10, 10]], "mpas_ocean.ConnectivityConstruction.time_n_nodes_per_face": [[0.0005094325169920921, 0.001845228485763073], [["'480km'", "'120km'"]], "eb11f7750b605d9f6ea6467f4d970fc820bcab30a71e4ebb06b2bae37172a76f", 1728970955271, 17.651, [0.00049844, 0.0014929], [0.00053624, 0.0022208], [0.00050462, 0.001524], [0.00051206, 0.0021895], [1, 1], [10, 10]], "mpas_ocean.ConstructFaceLatLon.time_cartesian_averaging": [null, [["'480km'", "'120km'"]], "fcc73b823334b3777b52a18124001965168d8ad70517cfb9f6f7032be10d6caa", 1728970750854, 0.18767], "mpas_ocean.ConstructFaceLatLon.time_welzl": [null, [["'480km'", "'120km'"]], "1cd1e29519b9368e0e4b542fc2ea0f0a08750e8f7fbd1b10b6f443af6024dae2", 1728970751042, 0.18774], "mpas_ocean.ConstructTreeStructures.time_ball_tree": [[3.041737133814106e-07, 1.2896243959799822e-06], [["'480km'", "'120km'"]], "e7a6195397c4d1d166a7853510f074734c6066eeb2f5d8adb15911a8b29fc6eb", 1728970964084, 2.1278, [2.9899e-07, 1.2816e-06], [3.1486e-07, 1.297e-06], [3.0172e-07, 1.2883e-06], [3.093e-07, 1.294e-06], [42201, 41871], [10, 10]], "mpas_ocean.ConstructTreeStructures.time_kd_tree": [[2.935042717351149e-07, 9.042184971768302e-07], [["'480km'", "'120km'"]], "aa75da38392d38d48c16e798d32c8fc13c405fba9bfd70f066899abe430b212e", 1728970965155, 1.9424, [2.8768e-07, 8.9567e-07], [3.0512e-07, 9.097e-07], [2.909e-07, 9.0243e-07], [2.9466e-07, 9.0683e-07], [39124, 37587], [10, 10]], "mpas_ocean.CrossSections.time_constant_lat_fast": [null, [["'480km'", "'120km'"], ["1", "2", "4", "8"]], "38d02b4d0b3526585869dee7be1ddaad0fc884e75b1ea2a09be43221571635e4", 1728970753269, 0.75377], "mpas_ocean.DualMesh.time_dual_mesh_construction": [null, [["'480km'", "'120km'"]], "4c77f40d6a63d0a30f57ff8da1c2be401d134379c52782c28349795153ff6ea8", 1728970754023, 0.19022], "mpas_ocean.GeoDataFrame.time_to_geodataframe": [[0.005306835286319256, 0.0804738299921155, 0.05598793597891927, 1.101135010831058], [["'480km'", "'120km'"], ["True", "False"]], "fdda72e8afd45608569fb3343f6f067cf3716dba26532eb142be9223fc5d0b98", 1728970966119, 50.771, [0.0051568, 0.079841, 0.05515, 1.0868], [0.0057336, 0.081031, 0.056943, 1.1613], [0.0051978, 0.08025, 0.05561, 1.0917], [0.00532, 0.08076, 0.056193, 1.109], [1, 1, 1, 1], [10, 10, 10, 8]], "mpas_ocean.Gradient.time_gradient": [[0.00030297300199399124, 0.00279475178103894], [["'480km'", "'120km'"]], "19b8246a1b7f7cd52ec73d727dca3bb45b1952d4ef7644d2f13f7929bb16c0ad", 1728970991589, 1.7285, [0.00030002, 0.0027879], [0.00030633, 0.0028031], [0.00030188, 0.0027922], [0.00030465, 0.0028003], [37, 4], [10, 10]], "mpas_ocean.HoleEdgeIndices.time_construct_hole_edge_indices": [null, [["'480km'", "'120km'"]], "a430053e96f9871237f9ff8ea704a577a4f63617ab7c6bed07eb840194d992b3", 1728970780593, 0.19078], "mpas_ocean.Integrate.time_integrate": [[0.01265984307974577, 0.17963983421213925], [["'480km'", "'120km'"]], "180accc984e741ea109341e013c286885335fc9eb4fc4bbe072ef49006c717f9", 1728971001380, 29.169, [0.01247, 0.17821], [0.013187, 0.18612], [0.012613, 0.17901], [0.012721, 0.18119], [1, 1], [6, 10]], "mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection": [[0.022241055499762297, 0.02221904299221933, 0.02207315037958324, 0.34703448018990457, 0.34997564763762057, 0.34957419405691326], [["'480km'", "'120km'"], ["'include'", "'exclude'", "'split'"]], "743db07382b77e8f1686d62df074bdbc72cb59afc76016db59c510653208b8a1", 1728971011279, 72.927, [0.021867, 0.02167, 0.021897, 0.34303, 0.34741, 0.34753], [0.022674, 0.022805, 0.023059, 0.3507, 0.37009, 0.35178], [0.02201, 0.02186, 0.021939, 0.34419, 0.34796, 0.34891], [0.022439, 0.022387, 0.022243, 0.34831, 0.35261, 0.34992], [1, 1, 1, 1, 1, 1], [10, 10, 10, 10, 10, 10]], "mpas_ocean.RemapDownsample.time_inverse_distance_weighted_remapping": [[0.05667963298037648], [], "35146054f62256ab927954781012aad8a15b03eef90a4aece78bf2b7002c4853", 1728971047186, 1.7629, [0.056577], [0.05711], [0.056628], [0.056714], [1], [10]], "mpas_ocean.RemapDownsample.time_nearest_neighbor_remapping": [[0.045976418536156416], [], "3454ce734208221027c7080a56f1e679ae092a93516752a89474d75d7a705472", 1728971048075, 2.9151, [0.045878], [0.046046], [0.045945], [0.04601], [1], [10]], "mpas_ocean.RemapUpsample.time_inverse_distance_weighted_remapping": [[0.3722534151747823], [], "0836cc8c471952d8a557cf8d6c1d3c0677d0193d4ad961126f0bd34dab5dd9b9", 1728971049249, 6.6013, [0.37147], [0.37387], [0.37204], [0.37256], [1], [10]], "mpas_ocean.RemapUpsample.time_nearest_neighbor_remapping": [[0.2722524118144065], [], "db94cc8878dce6417e0aa06f72be38042115986e62fe929389fb2b48d8c93582", 1728971052748, 4.7228, [0.27207], [0.27282], [0.27219], [0.27262], [1], [10]], "quad_hexagon.QuadHexagon.time_open_dataset": [[0.006994928466156125], [], "04f0374471175756c99c2792d638ac40872fdbe2301368ec39fd096f4195fa9a", 1728971054959, 1.3457, [0.0069345], [0.0070833], [0.0069565], [0.0070613], [2], [10]], "quad_hexagon.QuadHexagon.time_open_grid": [[0.005972145008854568], [], "23b984b5aa811d5e0d05013c8e071d46285a6908fa146376bc3ca71591fa251a", 1728971055170, 0.74435, [0.0059301], [0.0060084], [0.0059565], [0.005987], [2], [10]], "face_bounds.FaceBounds.peakmem_face_bounds": [[395890688, 397758464, 394846208, 394264576], [["PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/ugrid/quad-hexagon/grid.nc')", "PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/ugrid/geoflow-small/grid.nc')", "PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/scrip/outCSne8/outCSne8.nc')", "PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/mpas/QU/oQU480.231010.nc')"]], "264d64f2871bf9cf43d671ee77406801857632dd9da3cdd4302188c9f73740e4", 1728970847113, 46.165], "mpas_ocean.Gradient.peakmem_gradient": [[302018560, 319242240], [["'480km'", "'120km'"]], "2c5704784f88210b00288651dbcee688318ff4ebf5674568a090a297c508c8ff", 1728970991392, 0.19631], "mpas_ocean.Integrate.peakmem_integrate": [[368410624, 383926272], [["'480km'", "'120km'"]], "9627f636ac2c145feb90416484eb94c9b0fe421250ff0f8f4f89e526da8d2c9a", 1728970992439, 8.9413], "quad_hexagon.QuadHexagon.peakmem_open_dataset": [[294539264], [], "ad0aeefdf056572ee11796d0103ffa9a88e7bf04c8f9c3725d6c2d890fa188f0", 1728971054832, 0.065269], "quad_hexagon.QuadHexagon.peakmem_open_grid": [[294039552], [], "0d8b965012ecb7916a2b6ca64acae11befae73b3890c5e1ed06f092e9cb0def0", 1728971054898, 0.061669]}, "durations": {"<build>": 92.99333047866821}, "version": 2}
1 change: 1 addition & 0 deletions results/derecho-cpu/49fd637b-conda-py3.11-netcdf4-pip+pyfma-setuptools_scm-xarray.json
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1 @@
{"commit_hash": "49fd637bb96b193e9e1d011396f56d4f35a73267", "env_name": "conda-py3.11-netcdf4-pip+pyfma-setuptools_scm-xarray", "date": 1721253267000, "params": {"cpu": "AMD EPYC 7763 Milan", "machine": "derecho-cpu", "num_cpu": "128", "os": "linux", "ram": "256GB", "python": "3.11", "setuptools_scm": "", "xarray": "", "netcdf4": "", "pip+pyfma": ""}, "python": "3.11", "requirements": {"setuptools_scm": "", "xarray": "", "netcdf4": "", "pip+pyfma": ""}, "env_vars": {}, "result_columns": ["result", "params", "version", "started_at", "duration", "stats_ci_99_a", "stats_ci_99_b", "stats_q_25", "stats_q_75", "stats_number", "stats_repeat", "samples", "profile"], "results": {"face_bounds.FaceBounds.time_face_bounds": [[0.07849814160726964, 21.89093150640838, 2.218507638433948, 15.150209710001945], [["PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/ugrid/quad-hexagon/grid.nc')", "PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/ugrid/geoflow-small/grid.nc')", "PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/scrip/outCSne8/outCSne8.nc')", "PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/mpas/QU/oQU480.231010.nc')"]], "59ab137a0d4a031edd79f08b2454bef8eeb9cd8ef799f72e5272f249063ec61d", 1728969789409, 177.36, [0.076525, -2.2495, 2.1462, 8.4974], [0.079853, 46.031, 2.2793, 21.803], [0.076785, 21.65, 2.1559, 15.084], [0.079835, 22.132, 2.2723, 15.217], [1, 1, 1, 1], [10, 2, 8, 2]], "import.Imports.timeraw_import_uxarray": [null, [], "05d7358a621ba8469294e43469945f02cd99857a9d23b35cc2a37d5c90deaf20", 1728969876567, 20.834], "mpas_ocean.CheckNorm.time_check_norm": [null, [["'480km'", "'120km'"]], "80690bc549b4d4d30b9190960e39e99a70d987dd80b2fe9655f568b292f50f7c", 1728969629410, 0.71065], "mpas_ocean.ConnectivityConstruction.time_face_face_connectivity": [[0.044348557479679585, 0.6666089745704085], [["'480km'", "'120km'"]], "d17d64682605c89f3a4a41dacad12310025c7e894bde080abaa54192989d3bfe", 1728969885594, 10.249, [0.041981, 0.63099], [0.047366, 0.69376], [0.042379, 0.64485], [0.046185, 0.68624], [1, 1], [10, 10]], "mpas_ocean.ConnectivityConstruction.time_n_nodes_per_face": [[0.0004950948059558868, 0.0015328717418015003], [["'480km'", "'120km'"]], "eb11f7750b605d9f6ea6467f4d970fc820bcab30a71e4ebb06b2bae37172a76f", 1728969890879, 18.501, [0.00048981, 0.001349], [0.00051843, 0.0015764], [0.00049272, 0.0013537], [0.0005047, 0.0015409], [1, 1], [10, 10]], "mpas_ocean.ConstructFaceLatLon.time_cartesian_averaging": [null, [["'480km'", "'120km'"]], "fcc73b823334b3777b52a18124001965168d8ad70517cfb9f6f7032be10d6caa", 1728969644066, 0.37712], "mpas_ocean.ConstructFaceLatLon.time_welzl": [null, [["'480km'", "'120km'"]], "1cd1e29519b9368e0e4b542fc2ea0f0a08750e8f7fbd1b10b6f443af6024dae2", 1728969644443, 0.37456], "mpas_ocean.ConstructTreeStructures.time_ball_tree": [[3.046823190228299e-07, 1.3146770784528384e-06], [["'480km'", "'120km'"]], "e7a6195397c4d1d166a7853510f074734c6066eeb2f5d8adb15911a8b29fc6eb", 1728969900402, 3.2254, [2.9882e-07, 1.3017e-06], [3.1359e-07, 1.32e-06], [3.0017e-07, 1.306e-06], [3.0972e-07, 1.318e-06], [41284, 40965], [10, 10]], "mpas_ocean.ConstructTreeStructures.time_kd_tree": [[2.817546946725633e-07, 8.414967314338005e-07], [["'480km'", "'120km'"]], "aa75da38392d38d48c16e798d32c8fc13c405fba9bfd70f066899abe430b212e", 1728969902344, 2.7941, [2.8016e-07, 8.3295e-07], [2.8749e-07, 8.528e-07], [2.8066e-07, 8.3905e-07], [2.8456e-07, 8.4363e-07], [41494, 41649], [10, 10]], "mpas_ocean.CrossSections.time_constant_lat_fast": [null, [["'480km'", "'120km'"], ["1", "2", "4", "8"]], "38d02b4d0b3526585869dee7be1ddaad0fc884e75b1ea2a09be43221571635e4", 1728969647271, 1.5117], "mpas_ocean.DualMesh.time_dual_mesh_construction": [null, [["'480km'", "'120km'"]], "4c77f40d6a63d0a30f57ff8da1c2be401d134379c52782c28349795153ff6ea8", 1728969648783, 0.37822], "mpas_ocean.GeoDataFrame.time_to_geodataframe": [[0.005285779479891062, 0.10389681742526591, 0.056620517978444695, 1.2649211508687586], [["'480km'", "'120km'"], ["True", "False"]], "fdda72e8afd45608569fb3343f6f067cf3716dba26532eb142be9223fc5d0b98", 1728969903972, 53.542, [0.0051631, 0.099654, 0.056368, 1.2545], [0.0057057, 0.10804, 0.058227, 1.2685], [0.0052071, 0.10018, 0.056406, 1.2618], [0.0053191, 0.10682, 0.05668, 1.2661], [1, 1, 1, 1], [10, 10, 10, 8]], "mpas_ocean.Gradient.time_gradient": [[0.0002980361827404091, 0.002758618851657957], [["'480km'", "'120km'"]], "19b8246a1b7f7cd52ec73d727dca3bb45b1952d4ef7644d2f13f7929bb16c0ad", 1728969931336, 2.0941, [0.00029626, 0.0027498], [0.00029989, 0.0027778], [0.00029785, 0.002753], [0.00029871, 0.0027683], [38, 4], [10, 10]], "mpas_ocean.HoleEdgeIndices.time_construct_hole_edge_indices": [null, [["'480km'", "'120km'"]], "a430053e96f9871237f9ff8ea704a577a4f63617ab7c6bed07eb840194d992b3", 1728969676769, 0.37611], "mpas_ocean.Integrate.time_integrate": [[0.012314166408032179, 0.17944504646584392], [["'480km'", "'120km'"]], "180accc984e741ea109341e013c286885335fc9eb4fc4bbe072ef49006c717f9", 1728969952761, 32.197, [0.01207, 0.17789], [0.013241, 0.18095], [0.012285, 0.17912], [0.012364, 0.18], [1, 1], [6, 10]], "mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection": [[0.02282395539805293, 0.022403511218726635, 0.022579166339710355, 0.35717077902518213, 0.3573967474512756, 0.35563504695892334], [["'480km'", "'120km'"], ["'include'", "'exclude'", "'split'"]], "743db07382b77e8f1686d62df074bdbc72cb59afc76016db59c510653208b8a1", 1728969964380, 77.167, [0.022333, 0.022226, 0.02234, 0.35611, 0.3546, 0.35345], [0.023519, 0.022796, 0.023198, 0.3588, 0.35969, 0.35941], [0.022486, 0.022346, 0.022539, 0.35647, 0.356, 0.3554], [0.02292, 0.022554, 0.022777, 0.35795, 0.35907, 0.3567], [1, 1, 1, 1, 1, 1], [10, 10, 10, 10, 10, 10]], "mpas_ocean.RemapDownsample.time_inverse_distance_weighted_remapping": [[0.05684918654151261], [], "35146054f62256ab927954781012aad8a15b03eef90a4aece78bf2b7002c4853", 1728970001188, 2.2328, [0.056718], [0.056984], [0.056782], [0.056902], [1], [10]], "mpas_ocean.RemapDownsample.time_nearest_neighbor_remapping": [[0.045943665551021695], [], "3454ce734208221027c7080a56f1e679ae092a93516752a89474d75d7a705472", 1728970002434, 1.8393, [0.045849], [0.04607], [0.045895], [0.04603], [1], [10]], "mpas_ocean.RemapUpsample.time_inverse_distance_weighted_remapping": [[0.37144916062243283], [], "0836cc8c471952d8a557cf8d6c1d3c0677d0193d4ad961126f0bd34dab5dd9b9", 1728970003354, 6.6938, [0.37094], [0.37272], [0.37117], [0.37173], [1], [10]], "mpas_ocean.RemapUpsample.time_nearest_neighbor_remapping": [[0.27223696699365973], [], "db94cc8878dce6417e0aa06f72be38042115986e62fe929389fb2b48d8c93582", 1728970006405, 4.4039, [0.27188], [0.27261], [0.27202], [0.27241], [1], [10]], "quad_hexagon.QuadHexagon.time_open_dataset": [[0.006998219760134816], [], "04f0374471175756c99c2792d638ac40872fdbe2301368ec39fd096f4195fa9a", 1728970008974, 0.80107, [0.0069502], [0.0070548], [0.0069621], [0.0070389], [2], [10]], "quad_hexagon.QuadHexagon.time_open_grid": [[0.00593404402025044], [], "23b984b5aa811d5e0d05013c8e071d46285a6908fa146376bc3ca71591fa251a", 1728970009308, 0.43328, [0.0058458], [0.0060256], [0.0058654], [0.0060049], [2], [10]], "face_bounds.FaceBounds.peakmem_face_bounds": [[333209600, 335642624, 322105344, 300425216], [["PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/ugrid/quad-hexagon/grid.nc')", "PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/ugrid/geoflow-small/grid.nc')", "PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/scrip/outCSne8/outCSne8.nc')", "PosixPath('/glade/u/home/rtam/asv/uxarray/test/meshfiles/mpas/QU/oQU480.231010.nc')"]], "264d64f2871bf9cf43d671ee77406801857632dd9da3cdd4302188c9f73740e4", 1728969746525, 42.883], "mpas_ocean.Gradient.peakmem_gradient": [[295931904, 315953152], [["'480km'", "'120km'"]], "2c5704784f88210b00288651dbcee688318ff4ebf5674568a090a297c508c8ff", 1728969930947, 0.38902], "mpas_ocean.Integrate.peakmem_integrate": [[416755712, 377233408], [["'480km'", "'120km'"]], "9627f636ac2c145feb90416484eb94c9b0fe421250ff0f8f4f89e526da8d2c9a", 1728969932392, 20.369], "quad_hexagon.QuadHexagon.peakmem_open_dataset": [[237477888], [], "ad0aeefdf056572ee11796d0103ffa9a88e7bf04c8f9c3725d6c2d890fa188f0", 1728970008625, 0.1707], "quad_hexagon.QuadHexagon.peakmem_open_grid": [[236875776], [], "0d8b965012ecb7916a2b6ca64acae11befae73b3890c5e1ed06f092e9cb0def0", 1728970008795, 0.17849]}, "durations": {}, "version": 2}
Loading