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1. phenotypic_profiling phenotypic_profiling Public

   Machine learning for predicting 15 single-cell phenotypes from cell morphology profiles

   Jupyter Notebook 1 3

2. nf1_schwann_cell_painting_data nf1_schwann_cell_painting_data Public

   This repository contains all the modules to perform image-based analysis with CellProfiler on NF1 Schwann cell data.

   Jupyter Notebook 4 5

3. JUMP-single-cell JUMP-single-cell Public

   Single cell analysis of the JUMP Cell Painting consortium pilot data (cpg0000)

   Jupyter Notebook 4 4

4. pyroptosis_signature_image_profiling pyroptosis_signature_image_profiling Public

   This repository contains the pipelines used to analyze the data sets from the Interstellar collaboration.

   Jupyter Notebook 2 3

5. cellpainting_predicts_cardiac_fibrosis cellpainting_predicts_cardiac_fibrosis Public

   Image-based profiling and machine learning to predict failing vs. non-failing cardiac fibroblasts

   Jupyter Notebook 4 4

6. coSMicQC coSMicQC Public

   Single cell Morphology Quality Control (coSMicQC)

   Python 3 2