How samples from 10 periods compare in one graph

[Tang-pro]

Hi @EricKutschera

I'm using short read RNA-seq data, which contains 10 periods of samples, can this be shown in a graph?
Or I used the parameter -group-info, I want to compare the difference between the first period and the other nine periods, can I write it like this?

grouping.gf
Group1: 1 Group2: 2,10

[EricKutschera]

If you have 10 bam files then you should be able to include all 10 on the command line similar to the examples in the README (with only 6 samples)

The --group-info format is described in the README https://github.com/Xinglab/rmats2sashimiplot?tab=readme-ov-file#grouping

It sounds like you want:

Group1: 1
Group2: 2-10

[Tang-pro]

@EricKutschera
Thanks! I got it.