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[BUG] Fixed subsampling in highly imbalances datasets giving subsamples with only a single class #2305
[BUG] Fixed subsampling in highly imbalances datasets giving subsamples with only a single class #2305
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…f unbalanced datasets giving subsamples with only one class.
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Is there a situation where you wouldn't want to continue until there is a viable subsample? I would just use a while loop and continue until you do. No parameter needed then.
The only time this will backfire is if there is only 1 class in the input, but we should catch that higher up in input verification IMO.
this is good but we need a little time to discuss, I will put it on the agenda for the dev meeting on friday |
I was a bit caught up last week hence my late reply. @MatthewMiddlehurst I think your're right, the new parameter is actually not needed. I was thinking that given a large unbalanced dataset, the chance for drawing a subsample that contains just one class is high, but given the subsample size of 70% this chance is around 0.5 in the worst case. So just resampling until a valid sample is obtained should be fine. |
LGTM, thanks. |
@all-contributors add @ferewi for bug |
I've put up a pull request to add @ferewi! 🎉 |
Reference Issues/PRs
Fixes #1726
What does this implement/fix? Explain your changes.
Added new attribute 'max_subsamples' to subsample multiple times in case of unbalanced datasets giving subsamples with only one class. This caused TDE and HC2 to fail.
If a subsample with only a sinlge class is found, subsampling is repeated until the number of classes in the subsample is >1 or until max_subsamples is reached. In the latter case an AttributeError is raised.
Does your contribution introduce a new dependency? If yes, which one?
No
Any other comments?
In the Issue I proposed two ideas how to fix this and I went for a modified option 1 that does not lead to potentially infinite loops as it is more than 3 times faster compared to option 2 (StratifiedShuffleSplit).
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