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UofT_STA442-2101

This repository provides some coursework and projects for STA442/2101: Methods of Applied Statistics I in Fall 2019.

Please note STA442/2101 this year is very different from previous year. It is more similar to the previous STA2201: Methods of Applied Statistics II. Please do learn from this repository and pay attention to the academic integrity.

More info is available at Professor's website(Hopefully it will always kept): http://pbrown.ca/teaching/appliedstats

I hope this will help people who learn this course at UofT or anyone who is interested in advanced statistical model (GLMM, Bayesian model, Time series or Survival analysis).

Syllabus

Frequentist inference with Generalized Linear Models

  • Models and inference
  • Applications and interpretation

Applied statistics in practice

  • Scientific writing
  • Reproducible research
  • Linear mixed models and longitudinal data

Mixed models, maximum likelihood estimation and REML

  • Applications and interpretation
  • Correlation in time
  • Random coefficient models
  • Generalized Linear Mixed Models and Bayesian inference

Bayesian inference and INLA

  • Random effects models for non-Gaussian data
  • Applications and interpretation
  • Advanced INLA

Smoothing and semi-parametric models

  • Penalised likelihood and spline smoothing
  • Random walks and Bayesian semi-parametric

Survival analysis

  • Parametric event time distributions
  • Censored data
  • Hierarchical models for survival data

For more specific requirements for each assignment, refer to the assignment requirement PDF file within each assignment.

A1

GLM with gamma distribution; Logistic regression

A2

Mixed models with Bayesian inference using INLA

A3

Semi-parametric modelling and Time series with Bayesian inference using INLA

A4

Survival analysis with Bayesian inference using INLA; Conditional logistic regression

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