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1. openfold openfold Public

   Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

   Python 2.9k 573

2. genie2 genie2 Public

   Protein structure diffusion model for unconditional protein generation and motif scaffolding

   Python 148 23

3. genie genie Public

   De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds

   Python 178 20

4. rgn2 rgn2 Public

   Python 104 29

5. proteinnet proteinnet Public

   Standardized data set for machine learning of protein structure

   Python 886 131

6. hsm hsm Public

   Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."

   Jupyter Notebook 71 21