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1. dynamo-release dynamo-release Public

   Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

   Python 430 59

2. spateo-release spateo-release Public

   Spatiotemporal modeling of spatial transcriptomics

   Python 242 31

3. dynast-release dynast-release Public

   Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments

   Python 17 4

4. dynamo-tutorials dynamo-tutorials Public

   Tutorials on using latest dynamo package

   Jupyter Notebook 24 11

5. Scribe-py Scribe-py Public

   Regulatory networks with Direct Information in python

   Python 39 7

6. Scribe Scribe Public

   Forked from cole-trapnell-lab/Scribe

   Regulatory networks with Direct Information

   C++ 1