Filter fusion artifacts (resolves #29) #35
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resolves #29 related to BD2KGenomics/protect#237 Fusion calling often has FPS related to homology, especially among mitochondrial and (lnc,etc) RNA genes. Furthermore, transcriptional readthroughs are usually oncologically irrelevant. This PR adds filtering flags for mitochondrial, Immunoglobulin, RP11- (lncRNA) and transcriptional readthrough filtering.
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resolves #29
related to BD2KGenomics/protect#237
Fusion calling often has FPS related to homology, especially among
mitochondrial and (lnc,etc) RNA genes. Furthermore, transcriptional
readthroughs are usually oncologically irrelevant. This PR adds
filtering flags for mitochondrial, Immunoglobulin, RP11- (lncRNA) and
transcriptional readthrough filtering.