Add figure of modified sections to repropacks/process-all utils (#2)

.gitignore

@@ -9,4 +9,6 @@ postprocessing
 output
 snake.body
 
+snake-lips-2d-repropacks
+
 tmp

data/scripts/plot_modified_sections.py

@@ -30,7 +30,7 @@
     x_ref_ = x_ref + i
     ax.plot(x_ref_, y_ref, color='black', linestyle='--')
     ax.plot(x, y, color='black', linewidth=2)
-ax.axis('scaled', adjustable='box')
+ax.axis('scaled')
 ax.axis('off')
 fig.tight_layout()
 

data/scripts/process_all.py

@@ -0,0 +1,20 @@
+"""Run post-processing scripts."""
+
+import os
+import subprocess
+from pathlib import Path
+
+pwd = Path(__file__).absolute().parent
+os.environ['MPLBACKEND'] = 'AGG'  # set non-GUI backend to skip showing figures
+
+scripts = [
+    'plot_modified_sections.py',
+]
+
+for script in scripts:
+    print(f'[INFO] Running script {script} ...')
+    script = str(pwd / script)
+    p = subprocess.Popen(
+        f'python {script} --no-compute --no-show', shell=True
+    )
+    p.communicate()

misc/process_all.py

@@ -10,10 +10,10 @@
 rootdir = pwd.parent
 
 scripts = list((rootdir / 'runs').glob('**/process_all.py'))
+scripts += list((rootdir / 'data').glob('**/process_all.py'))
 
 for script in scripts:
     print(f'[INFO] Running script {script} ...')
-    script = str(pwd / script)
     p = subprocess.Popen(
         f'python {script}', shell=True
     )

misc/repropacks.py

@@ -62,3 +62,4 @@ def copy_repropacks_files(dir_from, dir_to):
     delete_repropacks(ROOTDIR / REPROPACKS_NAME)
     download_repo(GH_OWNER, GH_REPO, GH_BRANCH, ROOTDIR / REPROPACKS_NAME)
     copy_repropacks_files(ROOTDIR / 'runs', ROOTDIR / REPROPACKS_NAME / 'runs')
+    copy_repropacks_files(ROOTDIR / 'data', ROOTDIR / REPROPACKS_NAME / 'data')