Merge pull request #4 from bat/compathelper/new_version/2024-11-16-19… #20
Annotations
10 errors, 16 warnings, and 10 notices
Julia 1 - ubuntu-latest - x64 - push
Process completed with exit code 1.
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Julia nightly - ubuntu-latest - x64 - push
Process completed with exit code 1.
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Julia 1.3 - ubuntu-latest - x64 - push
Process completed with exit code 1.
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Julia 1 - macOS-latest - x64 - push
Process completed with exit code 1.
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Julia nightly - macOS-latest - x64 - push
Process completed with exit code 1.
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Julia 1 - windows-latest - x64 - push
Process completed with exit code 1.
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Julia 1.3 - macOS-latest - x64 - push
Process completed with exit code 1.
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Documentation
Process completed with exit code 1.
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Julia nightly - windows-latest - x64 - push
Process completed with exit code 1.
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Julia 1.3 - windows-latest - x64 - push
Process completed with exit code 1.
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Julia nightly - macOS-latest - x64 - push
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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Documentation
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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Julia 1.3 - macOS-latest - x64 - push
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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Julia 1 - macOS-latest - x64 - push
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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Julia 1.3 - ubuntu-latest - x64 - push
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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Julia nightly - ubuntu-latest - x64 - push
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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Julia 1 - ubuntu-latest - x64 - push
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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Julia 1.3 - windows-latest - x64 - push
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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Julia nightly - windows-latest - x64 - push
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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Julia 1 - windows-latest - x64 - push
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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Julia 1.3 - ubuntu-latest - x64 - push
The Pkg.test bounds checking behavior cannot be changed before Julia 1.6. VERSION=1.3.1, julia_args=["--check-bounds=yes", "--compiled-modules=yes"]
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Julia 1.3 - macOS-latest - x64 - push
The Pkg.test bounds checking behavior cannot be changed before Julia 1.6. VERSION=1.3.1, julia_args=["--check-bounds=yes", "--compiled-modules=yes"]
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Documentation:
../../../.julia/packages/Documenter/PLD7m/src/Expanders.jl#L564
failed to run `@example` block in src/index.md:114-120
```@example using_ultranest
using UltraNest
paramnames = ["a", "b", "c"]
smplr = ultranest.ReactiveNestedSampler(paramnames, loglikelihood_vectorized, transform = prior_transform_vectorized, vectorized = true)
result = smplr.run(min_num_live_points = 4000, cluster_num_live_points = 400)
```
value =
PyError ($(Expr(:escape, :(ccall(#= /home/runner/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:43 =# @pysym(:PyObject_Call), PyPtr, (PyPtr, PyPtr, PyPtr), o, pyargsptr, kw))))) <class 'AssertionError'>
AssertionError('Error in loglikelihood function: returned non-finite number: [-inf -inf] for input u=[[0.03602833 0.2707546 0.63997551]\n [0.49336795 0.72837105 0.67419701]] p=[[-1.85588666 -1.37547242 1.67970616]\n [-0.02652819 1.37022628 2.09036416]]')
File "/home/runner/.julia/conda/3/x86_64/lib/python3.12/site-packages/ultranest/integrator.py", line 1215, in __init__
if not self._check_likelihood_function(transform, loglike, num_test_samples):
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/runner/.julia/conda/3/x86_64/lib/python3.12/site-packages/ultranest/integrator.py", line 1282, in _check_likelihood_function
assert np.isfinite(logl).all(), (
^^^^^^^^^^^^^^^^^^^^^^^
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Documentation:
../../../.julia/packages/Documenter/PLD7m/src/Expanders.jl#L564
failed to run `@example` block in src/index.md:124-148
```@example using_ultranest
X_ultranest = result["samples"]
X_iid = Array(rand(dist, 10^4)')
using Plots
Plots.gr(size = (1024, 768), format = "png") # hide
function plot_marginal(d::NTuple{2,Integer})
if d[1] == d[2]
plt = stephist(X_iid[:,d[1]].+0.01, nbins = 200, normalize = true, label = "IID sampling", xlabel = paramnames[d[1]])
stephist!(plt, X_ultranest[:,d[1]], nbins = 200, normalize = true, label = "UltraNest")
plt
else
histogram2d(
X_ultranest[:,d[1]], X_ultranest[:,d[2]],
nbins = 200, xlabel = paramnames[d[1]], ylabel = paramnames[d[2]], legend = :none
)
end
end
plot(
plot_marginal.([(i, j) for i in 1:3, j in 1:3])...,
)
```
value =
UndefVarError: `result` not defined in `Main.var"ex-using_ultranest"`
Suggestion: check for spelling errors or missing imports.
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Documentation:
../../../.julia/packages/Documenter/PLD7m/src/Expanders.jl#L564
failed to run `@example` block in src/index.md:152-158
```@example using_ultranest
using Measurements
logz = result["logz"]
logzerr = result["logzerr"]
logz ± logzerr
```
value =
UndefVarError: `result` not defined in `Main.var"ex-using_ultranest"`
Suggestion: check for spelling errors or missing imports.
|
Julia 1.3 - windows-latest - x64 - push
The Pkg.test bounds checking behavior cannot be changed before Julia 1.6. VERSION=1.3.1, julia_args=["--check-bounds=yes", "--compiled-modules=yes"]
|
[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache. To ignore, set input `ignore-no-cache: true`
|
[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache. To ignore, set input `ignore-no-cache: true`
|
[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache. To ignore, set input `ignore-no-cache: true`
|
[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache. To ignore, set input `ignore-no-cache: true`
|
[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache. To ignore, set input `ignore-no-cache: true`
|
[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache. To ignore, set input `ignore-no-cache: true`
|
[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache. To ignore, set input `ignore-no-cache: true`
|
[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache. To ignore, set input `ignore-no-cache: true`
|
[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache. To ignore, set input `ignore-no-cache: true`
|
[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache. To ignore, set input `ignore-no-cache: true`
|