Fixed tests.

bbuchfink · May 31, 2023 · 14f3550 · 14f3550
1 parent c0a759d
commit 14f3550
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Showing 2 changed files with 6 additions and 5 deletions.
diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -486,7 +486,7 @@ install(TARGETS diamond DESTINATION bin)
 enable_testing()
 SET(TD ${CMAKE_SOURCE_DIR}/src/test)
 SET(SP -DTEST_DIR=${CMAKE_SOURCE_DIR}/src/test -P ${CMAKE_SOURCE_DIR}/src/test/test.cmake)
-add_test(NAME blastp COMMAND ${CMAKE_COMMAND} -DNAME=blastp "-DARGS=blastp -q ${TD}/1.faa -d ${TD}/2.faa" ${SP})
-add_test(NAME blastp-mid-sens COMMAND ${CMAKE_COMMAND} -DNAME=blastp-mid-sens "-DARGS=blastp -q ${TD}/3.faa -d ${TD}/4.faa --mid-sensitive" ${SP})
-add_test(NAME blastp-f0 COMMAND ${CMAKE_COMMAND} -DNAME=blastp-f0 "-DARGS=blastp -q ${TD}/1.faa -d ${TD}/2.faa -f 0" ${SP})
+add_test(NAME blastp COMMAND ${CMAKE_COMMAND} -DNAME=blastp "-DARGS=blastp -q ${TD}/1.faa -d ${TD}/2.faa -p1" ${SP})
+add_test(NAME blastp-mid-sens COMMAND ${CMAKE_COMMAND} -DNAME=blastp-mid-sens "-DARGS=blastp -q ${TD}/3.faa -d ${TD}/4.faa --mid-sensitive -p1" ${SP})
+add_test(NAME blastp-f0 COMMAND ${CMAKE_COMMAND} -DNAME=blastp-f0 "-DARGS=blastp -q ${TD}/1.faa -d ${TD}/2.faa -f0 -p1" ${SP})
 add_test(NAME diamond COMMAND diamond test)
diff --git a/src/test/test.cmake b/src/test/test.cmake
@@ -1,5 +1,6 @@
-SET(CMD "diamond ${ARGS} -o ${NAME}.out")
-separate_arguments (SEP NATIVE_COMMAND PROGRAM SEPARATE_ARGS ${CMD})
+SET(CMD "./diamond ${ARGS} -o ${NAME}.out")
+#separate_arguments (SEP NATIVE_COMMAND PROGRAM SEPARATE_ARGS ${CMD})
+separate_arguments (SEP NATIVE_COMMAND ${CMD})
 execute_process(COMMAND ${SEP} RESULT_VARIABLE CMD_RESULT)
 execute_process(COMMAND diff ${TEST_DIR}/${NAME}.out ${NAME}.out RESULT_VARIABLE DIFF_RESULT)
 if(NOT ${DIFF_RESULT} EQUAL 0)