DIAMOND v2.0.3

• Added a new sensitivity mode that is between the default mode and the sensitive mode in sensitivity (option --mid-sensitive).
• Added counters for total number of reference blocks, shapes and index chunks to the status messages.
• Fixed a bug (persisting since v2.0.2) that could cause secondary HSPs within one target not to be reported if the --max-hsps option was used with a non-default setting.
• Fixed a bug that could cause an invalid error message with regard to the database format in certain cases.
• The --no-self-hits option is no longer supported in blastx mode.
• Changed the semantics of the --no-self-hits option to check for equality of both sequence and sequence id, independent of the computed alignment.
• The selection of the top hit when using --top will respect the identity, coverage and no-self-hits filter settings (does not apply when frameshift alignment is enabled).
• The inclusion criterion for --top is applied to the bit score instead of the raw score and is no longer affected by integer rounding (does not apply when frameshift alignment is enabled).
• Improved the accuracy of the ranking heuristic.
• Added the options --ext-chunk-size and --no-ranking to control the ranking heuristic.