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DIAMOND v2.0.7
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@bbuchfink bbuchfink released this 12 Feb 12:35
· 253 commits to master since this release
v2.0.7
39cd865
  • Added support for computing full-matrix instead of banded Smith Waterman extensions (command line option --ext full).
  • Added support for the new prot.accession2taxid.FULL.gz taxonomy mapping file from NCBI.
  • Added the option --gapped-filter-evalue to set the e-value threshold of the gapped filter heuristic.
  • Added setting the scores of the mask letter according to BLAST rules when a compositionally adjusted matrix is used.
  • Changed formatting of e-values to print two decimals instead of one.
  • Added the output field qseq_translated to print the translation of the aligned part of the query sequence.
  • Added support for providing two input files to --query/-q when running alignment in blastx mode.
  • Added the output field full_qseq_mate to print the sequence of the query's mate (enabled when using two query files in blastx mode).
  • Fixed a bug that could cause a crash in blastx mode for very long queries.
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