reinstalling the qiime2 python env #13
Workflow file for this run
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| name: Build and test container image | |
| on: | |
| pull_request: | |
| jobs: | |
| test-build: | |
| runs-on: ubuntu-latest | |
| env: | |
| DOCKER_CONFIG: $HOME/.docker | |
| steps: | |
| - name: Checkout files in repo | |
| uses: actions/checkout@v4 | |
| - name: See if the image config changed | |
| id: changed-files | |
| uses: tj-actions/changed-files@v44 | |
| with: | |
| files_ignore: | | |
| README.md | |
| CONTRIBUTING.md | |
| LICENSE | |
| .github/** | |
| images/** | |
| - name: Cleanup disk space | |
| if: steps.changed-files.outputs.any_changed == 'true' | |
| run: | | |
| sudo rm -rf /usr/local/lib/android /usr/share/dotnet /opt/ghc | |
| df -h | |
| - name: Build and test the image if any image file(s) changed | |
| if: steps.changed-files.outputs.any_changed == 'true' | |
| uses: jupyterhub/repo2docker-action@master | |
| with: | |
| FORCE_REPO2DOCKER_VERSION: jupyter-repo2docker==2024.07.0 | |
| REPO_DIR: /srv/repo | |
| NO_PUSH: true | |
| # Lets us monitor disks getting full as images get bigger over time | |
| - name: Show how much disk space is left | |
| run: df -h |