[ENH] add support for BIDS MRS #862
Workflow file for this run
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--- | |
name: 'octave: tests' | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
on: | |
push: | |
branches: | |
- main | |
paths: | |
- '**.m' | |
pull_request: | |
branches: ['*'] | |
env: | |
OCTFLAGS: --no-gui --no-window-system --silent | |
jobs: | |
test: | |
strategy: | |
fail-fast: false | |
matrix: | |
test: [slow, fast] | |
runs-on: ubuntu-22.04 | |
steps: | |
- name: Clone bids-matlab | |
uses: actions/checkout@v4 | |
with: | |
submodules: true | |
fetch-depth: 1 | |
- name: Install dependencies | |
run: | | |
sudo apt-get -y -qq update | |
sudo apt-get -y install unzip wget | |
- name: Install bids validator | |
run: npm install -g bids-validator | |
- name: Install bids-example | |
run: | | |
cd tests | |
make data | |
- name: Install Moxunit and MOcov | |
run: | | |
git clone https://github.com/MOxUnit/MOxUnit.git --depth 1 | |
git clone https://github.com/MOcov/MOcov.git --depth 1 | |
- name: Install octave | |
run: | | |
sudo apt-get -y -qq update | |
sudo apt-get -y install \ | |
octave \ | |
liboctave-dev\ | |
octave-common \ | |
octave-io \ | |
octave-image \ | |
octave-signal \ | |
octave-statistics | |
make -C MOxUnit install | |
make -C MOcov install | |
- name: Install JSONio | |
run: | | |
git clone https://github.com/gllmflndn/JSONio.git --depth 1 | |
cd JSONio | |
mkoctfile --mex jsonread.c jsmn.c -DJSMN_PARENT_LINKS | |
octave $OCTFLAGS --eval "addpath(fullfile(pwd)); savepath();" | |
- name: Run fast tests Octave | |
if: matrix.test == 'fast' | |
run: | | |
octave $OCTFLAGS --eval "success = run_tests(); assert(success);" | |
- name: Run slow tests Octave | |
if: matrix.test == 'slow' | |
run: | | |
export SLOW=true | |
octave $OCTFLAGS --eval "success = run_tests(); assert(success);" |