Merge branch 'master' into dev

bids-standard · Sep 4, 2023 · 0008bb7 · 0008bb7
2 parents d3f339a + a094633
commit 0008bb7
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Showing 4 changed files with 20 additions and 3 deletions.
diff --git a/.github/workflows/run_tests_matlab.yml b/.github/workflows/run_tests_matlab.yml
@@ -19,15 +19,13 @@ on:
 jobs:
   test:
 
-
     strategy:
       fail-fast: false
       matrix:
         version: [R2021a, R2023a]
         os: [ubuntu-latest, macos-latest, windows-latest]
         test: [slow, fast]
 
-
     runs-on: ${{matrix.os}}
 
     steps:

diff --git a/schema.json b/schema.json
diff --git a/tests/data/reports/ds000117_anat.md b/tests/data/reports/ds000117_anat.md
@@ -6,6 +6,19 @@
 
 #### T1-weighted image
 
+The data acquisition was performed in the {{InstitutionName}}, {{InstitutionalDepartmentName}},
+{{InstitutionAddress}}.
+
+MRI scans were acquired at {{MagneticFieldStrength}} Tesla using a {{ManufacturersModelName}}
+system from {{Manufacturer}}, with serial number {{DeviceSerialNumber}}.
+The software version was {{SoftwareVersions}}.
+
+{{PulseSequenceType}} {{ScanningSequence}} {{SequenceVariant}} FLASH structural
+MRI data were collected ({{nb_slices}} slices; repetition time, TR= {{RepetitionTime}}
+s; echo time, TE= {{echo_time}} ms; flip angle, FA= {{FlipAngle}} deg; field
+of view, FOV= {{fov}} mm; matrix size= {{mat_size}}; voxel size= {{vox_size}}
+mm).
+
 The data acquisition was performed in the MRC Cognition and Brain Sciences Unit,
 {{InstitutionalDepartmentName}}, 15 Chaucer Road, Cambridge CB2 7EF, UK.
 

diff --git a/tests/tests_private/test_append_to_layout.m b/tests/tests_private/test_append_to_layout.m
@@ -71,6 +71,7 @@ function test_append_to_layout_basic()
                                             'acq', 'hd', ...
                                             'ce', '', ...
                                             'rec', '', ...
+                                            'echo', '', ...
                                             'part', ''));
 
   expected.anat.metafile = {};
@@ -79,6 +80,10 @@ function test_append_to_layout_basic()
   expected.anat.dependencies.data = {};
   expected.anat.dependencies.group = {};
 
+  fields = fieldnames(expected.anat);
+  for i = 1:numel(fields)
+    assertEqual(subject.anat.(fields{i}), expected.anat.(fields{i}));
+  end
   assertEqual(subject.anat, expected.anat);
 
 end
@@ -123,6 +128,7 @@ function test_append_to_structure_basic_test()
                                                   'acq', 'hd', ...
                                                   'ce', '', ...
                                                   'rec', '', ...
+                                                  'echo', '', ...
                                                   'part', ''));
   expected.anat(1, 1).metafile = {};