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@bio-datascience

Biomedical Statistics and Data Science @ LMU/HMGU Munich

Code repository of the Biomedical Statistics and Data Science Group @ LMU/HMGU Munich

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  1. Causal_Microbiome_Tutorial Causal_Microbiome_Tutorial Public

    Causal inference framework for environment-microbiome data applied to American Gut data.

    R 6 2

  2. c-lasso c-lasso Public

    Forked from Leo-Simpson/c-lasso

    c-lasso: a Python package for constrained sparse regression and classification

    HTML

  3. NetCoMi NetCoMi Public

    Forked from stefpeschel/NetCoMi

    Network Comparison for Microbial Compositional Data

    R

  4. tascCODA tascCODA Public

    tree-aggregated compositional analysis for high-throughput sequencing data

    Jupyter Notebook 8

  5. trac trac Public

    Forked from jacobbien/trac

    Tree-based Aggregation of Compositional Data

    R 1

  6. SpiecEasi SpiecEasi Public

    Forked from zdk123/SpiecEasi

    Sparse InversE Covariance estimation for Ecological Association and Statistical Inference

    R

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