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fixing spacing issues
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mortonjt authored Oct 17, 2019
1 parent 4218276 commit c84460e
Showing 1 changed file with 5 additions and 5 deletions.
10 changes: 5 additions & 5 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -125,8 +125,8 @@ qiime mmvec heatmap \
--i-ranks ranks.qza \
--m-microbe-metadata-file taxonomy.tsv \
--m-microbe-metadata-column Taxon \
--m-metabolite-metadata-file metabolite-metadata.txt \
--m-metabolite-metadata-column Compound_Source \
--m-metabolite-metadata-file metabolite-metadata.txt \
--m-metabolite-metadata-column Compound_Source \
--p-level 5 \
--o-visualization ranks-heatmap.qzv
```
Expand Down Expand Up @@ -155,12 +155,12 @@ qiime mmvec paired-heatmap \
--i-ranks ranks.qza \
--i-microbes-table otus_nt.qza \
--i-metabolites-table lcms_nt.qza \
--m-microbe-metadata-file taxonomy.tsv \
--m-microbe-metadata-file taxonomy.tsv \
--m-microbe-metadata-column Taxon \
--p-features TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTCAGCAAGTTGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATCCAAAACTACTGAGCTAGAGTACGGTAGAGGGTGGTGGAATTTCCTG \
--p-features TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTCAGCAAGTTGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATCCAAAACTACTGAGCTAGAGTACGGTAGAGGGTGGTGGAATTTCCTG \
--p-features TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTAGGCTTTGGAAACTGTTTAACTTGAGTGCAAGAGGGGAGAGTGGAATTCCATGT \
--p-top-k-microbes 0 \
--p-normalize rel_row \
--p-normalize rel_row \
--p-top-k-metabolites 100 \
--p-level 6 \
--o-visualization paired-heatmap-top2.qzv
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