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Curated 15 mappings (sangeethavempati)
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svempati21 authored and cthoyt committed Aug 18, 2023
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8 changes: 8 additions & 0 deletions src/biomappings/resources/incorrect.tsv
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Expand Up @@ -599,10 +599,14 @@ mesh C477269 3 beta-hydroxy-delta 5-steroid dehydrogenase, rat skos:exactMatch g
mesh C509674 marinocine protein, Marinomonas mediterranea skos:exactMatch go GO:0033736 L-lysine 6-oxidase activity semapv:ManualMappingCuration orcid:0000-0001-9439-5346
mesh C531673 Familial ependymoma skos:exactMatch doid DOID:5509 pediatric ependymoma semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C531763 Irritable heart skos:exactMatch doid DOID:0111154 postural orthostatic tachycardia syndrome semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh C535425 Congenital torticollis skos:exactMatch hp HP:0005988 Congenital muscular torticollis semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95
mesh C535442 Bile acid synthesis defect, congenital, 1 skos:exactMatch doid DOID:0050674 congenital bile acid synthesis defect semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C535536 Iridogoniodysgenesis, dominant type skos:exactMatch doid DOID:0050786 iridogoniodysgenesis syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C535568 Absent patella skos:exactMatch hp HP:0006443 Patellar aplasia semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95
mesh C535837 Pancreatic carcinoma, familial skos:exactMatch doid DOID:4905 pancreatic carcinoma semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C535847 Hay-Wells syndrome skos:exactMatch doid DOID:0090119 ankyloblepharon-ectodermal defects-cleft lip/palate syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C535968 Hereditary macular coloboma skos:exactMatch hp HP:0001116 Macular coloboma semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95
mesh C536021 Achromatopsia 1 skos:exactMatch hp HP:0011516 Achromatopsia semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95
mesh C536133 Meckel syndrome type 1 skos:exactMatch doid DOID:0050778 Meckel syndrome semapv:ManualMappingCuration orcid:0000-0001-9439-5346
mesh C536192 Brittle cornea syndrome 1 skos:exactMatch doid DOID:14775 brittle cornea syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C536277 Idiopathic dilation cardiomyopathy skos:exactMatch doid DOID:0110429 dilated cardiomyopathy 1H semapv:ManualMappingCuration orcid:0000-0003-1307-2508
Expand Down Expand Up @@ -632,11 +636,14 @@ mesh D000068256 Darbepoetin alfa skos:exactMatch hgnc 4392 GNAS semapv:ManualMap
mesh D000068437 Pemetrexed skos:exactMatch chebi CHEBI:17509 5'-S-methyl-5'-thioadenosine semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D000068800 Etanercept skos:exactMatch hgnc 11917 TNFRSF1B semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D000070636 Rotator Cuff Injuries skos:exactMatch efo 1001250 rotator cuff tear semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D000070636 Rotator Cuff Injuries skos:exactMatch hp HP:0032201 Rotator cuff tear semapv:ManualMappingCuration web semapv:LexicalMatching generate_hp_mesh_mappings.py 0.9
mesh D000071636 Protein Phosphatase 2C skos:exactMatch hgnc 9279 PDP1 semapv:ManualMappingCuration orcid:0000-0001-9439-5346
mesh D000074767 Diapause skos:exactMatch go GO:0030431 sleep semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D000075529 Solitary Kidney skos:exactMatch hp HP:0000122 Unilateral renal agenesis semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/492ede/scripts/import_gilda_mappings.py 0.95
mesh D000077190 Interferon alpha-2 skos:exactMatch hgnc 5423 IFNA2 semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D000077212 Ropivacaine skos:exactMatch chebi CHEBI:8890 (S)-ropivacaine semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D000077324 Crystalloid Solutions skos:exactMatch go GO:0044312 crystalloid semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D000152 Acne Vulgaris skos:exactMatch hp HP:0001061 Acne semapv:ManualMappingCuration web semapv:LexicalMatching generate_hp_mesh_mappings.py 0.9
mesh D000203 Activities of Daily Living skos:exactMatch efo 0008451 activities of daily living score measurement semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D000309 Adrenal Insufficiency skos:exactMatch doid DOID:10493 adrenal cortical hypofunction semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh D000371 Agglutination skos:exactMatch go GO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules semapv:ManualMappingCuration orcid:0000-0003-4423-4370
Expand All @@ -657,6 +664,7 @@ mesh D001661 Biliary Tract Neoplasms skos:exactMatch doid DOID:0050625 biliary t
mesh D001731 Bisphosphoglycerate Mutase skos:exactMatch go GO:0004619 phosphoglycerate mutase activity semapv:ManualMappingCuration orcid:0000-0001-9439-5346
mesh D001749 Urinary Bladder Neoplasms skos:exactMatch doid DOID:4007 bladder carcinoma semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh D001761 Bleomycin skos:exactMatch chebi CHEBI:3139 bleomycin A2 semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D001766 Blindness skos:exactMatch hp HP:0000572 Visual loss semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/492ede/scripts/import_gilda_mappings.py 0.95
mesh D001792 Blood Platelets skos:exactMatch efo 0009237 Estimated Platelets Measurement semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D001859 Bone Neoplasms skos:exactMatch efo 1000350 Malignant Bone Neoplasm semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D001907 Boutonneuse Fever skos:exactMatch doid DOID:0050035 African tick-bite fever semapv:ManualMappingCuration orcid:0000-0003-1307-2508
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9 changes: 9 additions & 0 deletions src/biomappings/resources/mappings.tsv
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Expand Up @@ -4539,6 +4539,7 @@ mesh C486356 FGF12 protein, human skos:exactMatch uniprot P61328 FGF12 semapv:Ma
mesh C486393 RAX protein, human skos:exactMatch uniprot Q9Y2V3 RAX semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C486593 PARVG protein, human skos:exactMatch uniprot Q9HBI0 PARVG semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C486655 BMF protein, human skos:exactMatch uniprot Q96LC9 BMF semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh C487483 ANNA-2 antibody, human skos:exactMatch hp HP:5000030 Anti-Ri antibody semapv:ManualMappingCuration web semapv:LexicalMatching generate_hp_mesh_mappings.py 0.9
mesh C488098 NXNL1 protein, human skos:exactMatch uniprot Q96CM4 NXNL1 semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh C488261 ZW10 protein, human skos:exactMatch uniprot O43264 ZW10 semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C488760 RAET1E protein, human skos:exactMatch uniprot Q8TD07 RAET1E semapv:ManualMappingCuration orcid:0000-0001-9439-5346
Expand Down Expand Up @@ -4719,6 +4720,7 @@ mesh C535419 Charcot-Marie-Tooth disease, Type 4A skos:exactMatch doid DOID:0110
mesh C535420 Charcot-Marie-Tooth disease, Type 4B1 skos:exactMatch doid DOID:0110191 Charcot-Marie-Tooth disease type 4B1 semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh C535421 Charcot-Marie-Tooth disease, Type 4B2 skos:exactMatch doid DOID:0110190 Charcot-Marie-Tooth disease type 4B2 semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh C535436 Bethlem myopathy skos:exactMatch doid DOID:0050663 Bethlem myopathy semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh C535438 Bidirectional tachycardia skos:exactMatch hp HP:0034040 Bidirectional ventricular tachycardia semapv:ManualMappingCuration web semapv:LexicalMatching generate_hp_mesh_mappings.py 0.9
mesh C535440 Bietti Crystalline Dystrophy skos:exactMatch doid DOID:0050664 Bietti crystalline corneoretinal dystrophy semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh C535441 Bifid nose skos:exactMatch hp HP:0011803 Bifid nose semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh C535443 Bile acid synthesis defect, congenital, 2 skos:exactMatch doid DOID:0111069 congenital bile acid synthesis defect 2 semapv:ManualMappingCuration orcid:0000-0003-1307-2508
Expand Down Expand Up @@ -4752,6 +4754,7 @@ mesh C535566 Absent corpus callosum cataract immunodeficiency skos:exactMatch do
mesh C535572 Cantu syndrome skos:exactMatch doid DOID:0060569 hypertrichotic osteochondrodysplasia Cantu type semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C535579 Cardiofaciocutaneous syndrome skos:exactMatch doid DOID:0060233 cardiofaciocutaneous syndrome semapv:ManualMappingCuration orcid:0000-0001-9439-5346
mesh C535581 Cardiomyopathy dilated with Woolly hair and keratoderma skos:exactMatch doid DOID:0090128 Carvajal syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C535584 Cardiomyopathy, infantile histiocytoid skos:exactMatch hp HP:0005152 Histiocytoid cardiomyopathy semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95
mesh C535588 Carnitine palmitoyl transferase 1A deficiency skos:exactMatch doid DOID:0090129 carnitine palmitoyltransferase I deficiency semapv:ManualMappingCuration orcid:0000-0001-9439-5346
mesh C535600 dopamine beta hydroxylase deficiency skos:exactMatch doid DOID:0090145 dopamine beta-hydroxylase deficiency semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C535601 Dosage-sensitive sex reversal skos:exactMatch doid DOID:0111777 46,XY sex reversal 2 semapv:ManualMappingCuration orcid:0000-0003-1307-2508
Expand Down Expand Up @@ -4787,6 +4790,7 @@ mesh C535780 Spondylocarpotarsal synostosis skos:exactMatch doid DOID:0090116 sp
mesh C535786 Spondyloepimetaphyseal dysplasia, sponastrime type skos:exactMatch doid DOID:5684 spondyloepimetaphyseal dysplasia, Sponastrime type semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C535788 Spondyloepiphyseal dysplasia, congenita skos:exactMatch doid DOID:14789 spondyloepiphyseal dysplasia congenita semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C535789 Spondyloepiphyseal dysplasia, Omani type skos:exactMatch doid DOID:0050813 spondyloepiphyseal dysplasia with congenital joint dislocations semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C535802 Sprengel deformity skos:exactMatch hp HP:0000912 Sprengel anomaly semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95
mesh C535803 succinic semialdehyde dehydrogenase deficiency skos:exactMatch doid DOID:0060175 succinic semialdehyde dehydrogenase deficiency semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C535811 Molybdenum cofactor deficiency skos:exactMatch hp HP:0003570 Molybdenum cofactor deficiency semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh C535813 Neuropathy, hereditary motor and sensory, Russe type skos:exactMatch doid DOID:0110196 Charcot-Marie-Tooth disease type 4G semapv:ManualMappingCuration orcid:0000-0003-1307-2508
Expand Down Expand Up @@ -4841,6 +4845,7 @@ mesh C536096 Myoclonic dystonia skos:exactMatch doid DOID:0090033 myoclonic dyst
mesh C536102 Myopathy, congenital nonprogressive with Moebius and Robin sequences skos:exactMatch doid DOID:0080194 Carey-Fineman-Ziter syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C536106 Myostatin-related muscle hypertrophy skos:exactMatch doid DOID:0111072 myostatin-related muscle hypertrophy semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C536108 N syndrome skos:exactMatch doid DOID:0050769 N syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C536111 Partial agenesis of corpus callosum skos:exactMatch hp HP:0001338 Partial agenesis of the corpus callosum semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95
mesh C536123 Nivelon Nivelon Mabille syndrome skos:exactMatch doid DOID:0060644 chondrodysplasia-pseudohermaphroditism syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C536129 Achromatopsia 3 skos:exactMatch doid DOID:0110008 achromatopsia 3 semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C536131 Meckel syndrome type 2 skos:exactMatch doid DOID:0070116 Meckel syndrome 2 semapv:ManualMappingCuration orcid:0000-0003-1307-2508
Expand Down Expand Up @@ -4917,6 +4922,7 @@ mesh C536494 Uveal melanoma skos:exactMatch hp HP:0007716 Uveal melanoma semapv:
mesh C536495 VACTERL association skos:exactMatch doid DOID:14679 VACTERL association semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C536510 Thiamine responsive megaloblastic anemia syndrome skos:exactMatch doid DOID:0090117 thiamine-responsive megaloblastic anemia syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C536512 Thiopurine S methyltranferase deficiency skos:exactMatch doid DOID:0080172 thiopurine S-methyltransferase deficiency semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C536524 Valinemia skos:exactMatch hp HP:0010910 Hypervalinemia semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95
mesh C536525 Valproic acid antenatal infection skos:exactMatch doid DOID:0060471 fetal valproate syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C536528 Van der Woude syndrome skos:exactMatch doid DOID:0060239 Van der Woude syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C536530 Van Maldergem Wetzburger Verloes syndrome skos:exactMatch doid DOID:0060238 Van Maldergem syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
Expand Down Expand Up @@ -5235,6 +5241,7 @@ mesh C538344 Navajo neurohepatopathy skos:exactMatch doid DOID:0080125 mitochond
mesh C538346 Naxos disease skos:exactMatch doid DOID:0080551 Naxos disease semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C538348 Nemaline myopathy 1 skos:exactMatch doid DOID:0110926 nemaline myopathy 1 semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C538351 Nemaline myopathy 4 skos:exactMatch doid DOID:0110932 nemaline myopathy 4 semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C538354 Potato nose skos:exactMatch hp HP:0000414 Bulbous nose semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95
mesh C538355 Potocki-Lupski syndrome skos:exactMatch doid DOID:0060853 Potocki-Lupski syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C538356 Potocki-Shaffer syndrome skos:exactMatch doid DOID:0111687 Potocki-Shaffer syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C538361 Reticular dysgenesis skos:exactMatch doid DOID:0060020 reticular dysgenesis semapv:ManualMappingCuration orcid:0000-0003-1307-2508
Expand Down Expand Up @@ -5302,6 +5309,7 @@ mesh C562489 Lymphoid Interstitial Pneumonia skos:exactMatch doid DOID:0050159 l
mesh C562509 Popliteal Pterygium Syndrome skos:exactMatch doid DOID:0060055 popliteal pterygium syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C562524 Fibrochondrogenesis skos:exactMatch doid DOID:0060465 fibrochondrogenesis semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C562538 Cerebrocostomandibular Syndrome skos:exactMatch doid DOID:0111248 cerebrocostomandibular syndrome semapv:ManualMappingCuration orcid:0000-0003-1307-2508
mesh C562546 Megalodactyly skos:exactMatch hp HP:0004099 Macrodactyly semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95
mesh C562562 Colonic Atresia skos:exactMatch hp HP:0010448 Colonic atresia semapv:ManualMappingCuration orcid:0000-0001-9439-5346
mesh C562563 Microcolon skos:exactMatch hp HP:0004388 Microcolon semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh C562568 Cerebellar Hypoplasia skos:exactMatch doid DOID:0070338 cerebellar hypoplasia semapv:ManualMappingCuration orcid:0000-0003-1307-2508
Expand Down Expand Up @@ -6025,6 +6033,7 @@ mesh D000009 Abdominal Muscles skos:exactMatch ncit C32040 Abdominal Muscle sema
mesh D000019 Abortifacient Agents skos:exactMatch chebi CHEBI:50691 abortifacient semapv:ManualMappingCuration orcid:0000-0001-9439-5346
mesh D000022 Abortion, Spontaneous skos:exactMatch ncit C34336 Spontaneous Abortion semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D000038 Abscess skos:exactMatch hp HP:0025615 Abscess semapv:ManualMappingCuration orcid:0000-0003-4423-4370
mesh D000058 Accidental Falls skos:exactMatch hp HP:0002527 Falls semapv:ManualMappingCuration web semapv:LexicalMatching https://github.com/biomappings/biomappings/blob/a80ed2/scripts/import_gilda_mappings.py 0.95
mesh D000066450 Mouse Embryonic Stem Cells skos:exactMatch efo 0004038 mouse embryonic stem cell semapv:ManualMappingCuration orcid:0000-0001-9439-5346
mesh D000066530 Neurological Rehabilitation skos:exactMatch ncit C157934 Neurological Rehabilitation semapv:ManualMappingCuration orcid:0000-0001-9439-5346
mesh D000067128 Extracellular Vesicles skos:exactMatch go GO:1903561 extracellular vesicle semapv:ManualMappingCuration orcid:0000-0001-9439-5346
Expand Down
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