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Add 3di encoding to biotite.structure #524

Add 3di encoding to biotite.structure

Add 3di encoding to biotite.structure #524

Triggered via pull request October 15, 2024 12:31
Status Failure
Total duration 12m 28s
Artifacts 8

test_and_deploy.yml

on: pull_request
Test interfaces to databases and applications
6m 52s
Test interfaces to databases and applications
Generate wheels matrix
14s
Generate wheels matrix
Check code style
14s
Check code style
Build source distribution
31s
Build source distribution
Build documentation
4m 7s
Build documentation
Test interface to Muscle 5
56s
Test interface to Muscle 5
Compile the CCD subset for structure.info from the wwPDB CCD
3m 39s
Compile the CCD subset for structure.info from the wwPDB CCD
Run benchmarks
5m 16s
Run benchmarks
Matrix: Build & Test
Upload documentation to GitHub Releases
4s
Upload documentation to GitHub Releases
Upload package to GitHub Releases & PyPI
0s
Upload package to GitHub Releases & PyPI
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14 errors and 2 warnings
Check code style
Process completed with exit code 1.
Build & Test (cp311-macosx_x86_64, macos-latest)
Command ['arch', '-x86_64', '/bin/sh', '-c', 'pytest /Users/runner/work/biotite/biotite --durations=50 --ignore=/Users/runner/work/biotite/biotite//tests//sequence//align//test_statistics.py --ignore=/Users/runner/work/biotite/biotite//tests//application --ignore=/Users/runner/work/biotite/biotite//tests//database --ignore=/Users/runner/work/biotite/biotite//tests//test_doctest.py --ignore=/Users/runner/work/biotite/biotite//tests//test_modname.py\n'] failed with code 1.
Build & Test (cp311-macosx_x86_64, macos-latest)
Process completed with exit code 1.
Build & Test (cp311-win_amd64, windows-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
Build & Test (cp310-win_amd64, windows-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
Build & Test (cp313-win_amd64, windows-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
Build & Test (cp312-win_amd64, windows-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
Build & Test (cp310-manylinux_x86_64, ubuntu-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
Build & Test (cp312-manylinux_x86_64, ubuntu-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
Build & Test (cp313-macosx_x86_64, macos-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
Build & Test (cp310-macosx_x86_64, macos-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
Build & Test (cp311-manylinux_x86_64, ubuntu-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
Build & Test (cp313-manylinux_x86_64, ubuntu-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
Build & Test (cp312-macosx_x86_64, macos-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
Compile the CCD subset for structure.info from the wwPDB CCD
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run benchmarks
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/

Artifacts

Produced during runtime
Name Size
ccd Expired
16.6 MB
documentation Expired
73.6 MB
internal-build Expired
20.1 MB
release-cp310-macosx_arm64 Expired
19.4 MB
release-cp311-macosx_arm64 Expired
19.4 MB
release-cp312-macosx_arm64 Expired
19.4 MB
release-cp313-macosx_arm64 Expired
19.4 MB
release-sdist Expired
16.6 MB